RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 BHLHE23Q8NDY6 225 aa16.58■□□□□ 0.24
SMPD1-201ENST00000342245 FAM46BQ96A09 425 aa16.58■□□□□ 0.24
SMPD1-201ENST00000342245 RASD2Q96D21 266 aa16.58■□□□□ 0.24
SMPD1-201ENST00000342245 RAB39BQ96DA2 213 aa16.58■□□□□ 0.24
SMPD1-201ENST00000342245 OR10C1Q96KK4 312 aa16.58■□□□□ 0.24
SMPD1-201ENST00000342245 CMKLR1Q99788 373 aa16.58■□□□□ 0.24
SMPD1-201ENST00000342245 GINS3Q9BRX5 216 aa16.58■□□□□ 0.24
SMPD1-201ENST00000342245 ULBP3Q9BZM4 244 aa16.58■□□□□ 0.24
SMPD1-201ENST00000342245 ZMAT3Q9HA38 289 aaKnown RBP16.58■□□□□ 0.24
SMPD1-201ENST00000342245 SUSD2Q9UGT4 822 aa16.58■□□□□ 0.24
SMPD1-201ENST00000342245 A0A1B0GTH9 108 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 LEFTY1O75610 366 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 IGFBP3P17936 291 aaPredicted RBP16.57■□□□□ 0.24
SMPD1-201ENST00000342245 ALOX5APP20292 161 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 TMEM33P57088 247 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 WDR38Q5JTN6 314 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 FCRL6Q6DN72 434 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 C9orf40Q8IXQ3 194 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 COX18Q8N8Q8 333 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 OR8G5Q8NG78 346 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 ADGRG7Q96K78 797 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 HCSTQ9UBK5 93 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 FIGNL2A6NMB9 653 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 GDI1P31150 447 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 H3F3AP84243 136 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 PRDX1Q06830 199 aaKnown RBP16.57■□□□□ 0.24
SMPD1-201ENST00000342245 C1orf100Q5SVJ3 147 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 AMZ2Q86W34 360 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 OR52E1Q8NGJ3 308 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 SHDQ96IW2 340 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 SPHK2Q9NRA0 654 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 OR52A1Q9UKL2 312 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 MRPS18CQ9Y3D5 142 aaKnown RBP16.57■□□□□ 0.24
SMPD1-201ENST00000342245 V9GYS6 101 aa16.57■□□□□ 0.24
SMPD1-201ENST00000342245 ZNF264O43296 627 aa16.56■□□□□ 0.24
SMPD1-201ENST00000342245 QDPRP09417 244 aa16.56■□□□□ 0.24
SMPD1-201ENST00000342245 FPR2P25090 351 aa16.56■□□□□ 0.24
SMPD1-201ENST00000342245 VASPP50552 380 aaPredicted RBP16.56■□□□□ 0.24
SMPD1-201ENST00000342245 ODF4Q2M2E3 257 aa16.56■□□□□ 0.24
SMPD1-201ENST00000342245 EXOSC6Q5RKV6 272 aaKnown RBP16.56■□□□□ 0.24
SMPD1-201ENST00000342245 VAX1Q5SQQ9 334 aa16.56■□□□□ 0.24
SMPD1-201ENST00000342245 ZNF547Q8IVP9 402 aa16.56■□□□□ 0.24
SMPD1-201ENST00000342245 C1orf87Q8N0U7 546 aa16.56■□□□□ 0.24
SMPD1-201ENST00000342245 NKAIN3Q8N8D7 197 aa16.56■□□□□ 0.24
SMPD1-201ENST00000342245 SLC25A43Q8WUT9 341 aaPredicted RBP16.56■□□□□ 0.24
SMPD1-201ENST00000342245 ANKRD9Q96BM1 317 aaPredicted RBP16.56■□□□□ 0.24
SMPD1-201ENST00000342245 OR2M4Q96R27 311 aa16.56■□□□□ 0.24
SMPD1-201ENST00000342245 ASCL3Q9NQ33 180 aa16.56■□□□□ 0.24
SMPD1-201ENST00000342245 DKKL1Q9UK85 242 aa16.56■□□□□ 0.24
SMPD1-201ENST00000342245 HS3ST3B1Q9Y662 390 aa16.56■□□□□ 0.24
SMPD1-201ENST00000342245 FAM171A2A8MVW0 826 aa16.56■□□□□ 0.24
SMPD1-201ENST00000342245 PRH1P02810 166 aa16.56■□□□□ 0.24
SMPD1-201ENST00000342245 GNG10P50151 68 aa16.56■□□□□ 0.24
SMPD1-201ENST00000342245 SLC9A3R2Q15599 337 aa16.56■□□□□ 0.24
SMPD1-201ENST00000342245 CDRT4Q8N9R6 151 aa16.56■□□□□ 0.24
SMPD1-201ENST00000342245 OR4K15Q8NH41 348 aa16.56■□□□□ 0.24
SMPD1-201ENST00000342245 TVP23CQ96ET8 276 aa16.56■□□□□ 0.24
SMPD1-201ENST00000342245 CCNL2Q96S94 520 aaPredicted RBP16.56■□□□□ 0.24
SMPD1-201ENST00000342245 C5orf66Q9H5L9 145 aa16.56■□□□□ 0.24
SMPD1-201ENST00000342245 MRPS18BQ9Y676 258 aaKnown RBP16.56■□□□□ 0.24
SMPD1-201ENST00000342245 RAMP1O60894 148 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 ZNF708P17019 499 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 CDKN2AP42771 156 aaKnown RBP16.55■□□□□ 0.24
SMPD1-201ENST00000342245 GATMP50440 423 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 RPS4XP62701 263 aaKnown RBP16.55■□□□□ 0.24
SMPD1-201ENST00000342245 ZNF765Q7L2R6 523 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 ZNF283Q8N7M2 679 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 ABHD5Q8WTS1 349 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 FRZBQ92765 325 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 TMEM230Q96A57 120 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 PRRX2Q99811 253 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 MENTQ9BUN1 341 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 C6orf106Q9H6K1 298 aaPredicted RBP16.55■□□□□ 0.24
SMPD1-201ENST00000342245 GSKIPQ9P0R6 139 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 C19orf53Q9UNZ5 99 aaPredicted RBP16.55■□□□□ 0.24
SMPD1-201ENST00000342245 ZNF217O75362 1048 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 DEDDO75618 318 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 GALTP07902 379 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 EPHA1P21709 976 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 BCL6P41182 706 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 ERVFRD-1P60508 538 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 DLK1P80370 383 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 MRPS11P82912 194 aaKnown RBP16.55■□□□□ 0.24
SMPD1-201ENST00000342245 Q7L0L9 218 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 ZNF550Q7Z398 422 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 SLC35E3Q7Z769 313 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 KTI12Q96EK9 354 aaPredicted RBP16.55■□□□□ 0.24
SMPD1-201ENST00000342245 FAM210BQ96KR6 192 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 GPR87Q9BY21 358 aa16.55■□□□□ 0.24
SMPD1-201ENST00000342245 TGIF2-C20orf24A0A0A6YYL0 155 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 ZNF727A8MUV8 499 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 CDRT15L2A8MXV6 281 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 C4orf51C9J302 202 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 IL18BPO95998 194 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 P2RY1P47900 373 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 NPY4RP50391 375 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 GVQW1Q8N7I0 195 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 OR13C9Q8NGT0 318 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 OR6N2Q8NGY6 317 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 ZNF385AQ96PM9 386 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms