RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 MFAP5Q13361 173 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 SLC25A25Q6KCM7 469 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 RPL22L1Q6P5R6 122 aaKnown RBP11.62□□□□□ -0.55
COL18A1-201ENST00000342220 DBX2Q6ZNG2 339 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 ST8SIA1Q92185 356 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 LIN37Q96GY3 246 aaPredicted RBP11.62□□□□□ -0.55
COL18A1-201ENST00000342220 DDOQ99489 341 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 MNTQ99583 582 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 DNTTIP1Q9H147 329 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 C20orf85Q9H1P6 137 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 CHST11Q9NPF2 352 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 MEIKINA0A087WXM9 373 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 SPP1P10451 314 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 PTHLHP12272 177 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 SRMP19623 302 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 SELENOPP49908 381 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 C9orf152Q5JTZ5 239 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.62□□□□□ -0.55
COL18A1-201ENST00000342220 WDFY1Q8IWB7 410 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 DNAAF1Q8NEP3 725 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 CCNL2Q96S94 520 aaPredicted RBP11.62□□□□□ -0.55
COL18A1-201ENST00000342220 ZPBPQ9BS86 351 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 METTL17Q9H7H0 456 aaPredicted RBP11.62□□□□□ -0.55
COL18A1-201ENST00000342220 MBD2Q9UBB5 411 aa11.62□□□□□ -0.55
COL18A1-201ENST00000342220 CDV3Q9UKY7 258 aaKnown RBP11.62□□□□□ -0.55
COL18A1-201ENST00000342220 AKAP6Q13023 2319 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 FREM1Q5H8C1 2179 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 TUBAL3A6NHL2 446 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 ANXA2P2A6NMY6 339 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 L7N2F9 121 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 GLCEO94923 617 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 LY86O95711 162 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 PTGDSP41222 190 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 UBE2NLQ5JXB2 153 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 OR52I2Q8NH67 350 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 OR56B4Q8NH76 319 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 M1APQ8TC57 530 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 ALKBH3Q96Q83 286 aaPredicted RBP11.61□□□□□ -0.55
COL18A1-201ENST00000342220 OR10A4Q9H209 315 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 TNRC6BQ9UPQ9 1833 aaKnown RBP11.61□□□□□ -0.55
COL18A1-201ENST00000342220 PRR32B1ATL7 298 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 GSTZ1O43708 216 aaPredicted RBP11.61□□□□□ -0.55
COL18A1-201ENST00000342220 GATBO75879 557 aaKnown RBP11.61□□□□□ -0.55
COL18A1-201ENST00000342220 BEND4Q6ZU67 534 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 FCRLAQ7L513 359 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 DCXRQ7Z4W1 244 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 MRPS24Q96EL2 167 aaKnown RBP11.61□□□□□ -0.55
COL18A1-201ENST00000342220 LRFN5Q96NI6 719 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 ZNF385AQ96PM9 386 aaKnown RBP11.61□□□□□ -0.55
COL18A1-201ENST00000342220 B9D1Q9UPM9 204 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 A0A1B0GV90 55 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 VEGFCP49767 419 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 CCR9P51686 369 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 CARD18P57730 90 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 NANOS3P60323 173 aaKnown RBP11.61□□□□□ -0.55
COL18A1-201ENST00000342220 GLO1Q04760 184 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 EIF3IQ13347 325 aaKnown RBP11.61□□□□□ -0.55
COL18A1-201ENST00000342220 DYRK1AQ13627 763 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 Q6ZTK2 550 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 OR10AC1Q8NH08 325 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 EDARADDQ8WWZ3 215 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 SLC25A38Q96DW6 304 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 MRGPRX4Q96LA9 322 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 CALHM2Q9HA72 323 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 HRASLSQ9HDD0 168 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 KLK11Q9UBX7 282 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 SH3BGRL2Q9UJC5 107 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 FBXL3Q9UKT7 428 aa11.61□□□□□ -0.55
COL18A1-201ENST00000342220 DIDO1Q9BTC0 2240 aaKnown RBP11.6□□□□□ -0.55
COL18A1-201ENST00000342220 A0A0J9YW62 118 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 F5H5K5 113 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 WT1P19544 449 aaPredicted RBP11.6□□□□□ -0.55
COL18A1-201ENST00000342220 S100PP25815 95 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 GNALP38405 381 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 GGTLC2Q14390 218 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 SPOCK3Q9BQ16 436 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 C7orf50Q9BRJ6 194 aaKnown RBP11.6□□□□□ -0.55
COL18A1-201ENST00000342220 DDA1Q9BW61 102 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 OR51B6Q9H340 312 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 TXNIPQ9H3M7 391 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 MYO7BQ6PIF6 2116 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 LOC102723996A0A087X1L8 192 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 LIPT2A6NK58 231 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 ZNF879B4DU55 563 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 MS4A18H0YCH9 400 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 CTDSPLO15194 276 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 HPP00738 406 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 IFNA4P05014 189 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 CD63P08962 238 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 SNRPEP62304 92 aaKnown RBP11.6□□□□□ -0.55
COL18A1-201ENST00000342220 MS4A18Q3C1V0 323 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 FAAP20Q6NZ36 180 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 UNQ9370/PRO34162Q6UXP9 181 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 FGD2Q7Z6J4 655 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 CBLN2Q8IUK8 224 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 ABHD3Q8WU67 409 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 RGP1Q92546 391 aaPredicted RBP11.6□□□□□ -0.55
COL18A1-201ENST00000342220 C12orf49Q9H741 205 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 ASH2LQ9UBL3 628 aa11.6□□□□□ -0.55
COL18A1-201ENST00000342220 SCP2D1Q9UJQ7 156 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms