RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 SLC2A1P11166 492 aa13.02□□□□□ -0.33
VAPA-201ENST00000340541 RBMXP38159 391 aaKnown RBP13.02□□□□□ -0.33
VAPA-201ENST00000340541 NAA10P41227 235 aaPredicted RBP13.02□□□□□ -0.33
VAPA-201ENST00000340541 SLC6A9P48067 706 aa13.02□□□□□ -0.33
VAPA-201ENST00000340541 ZNF92Q03936 586 aa13.02□□□□□ -0.33
VAPA-201ENST00000340541 KRTAP24-1Q3LI83 254 aa13.02□□□□□ -0.33
VAPA-201ENST00000340541 GLYATL3Q5SZD4 288 aa13.02□□□□□ -0.33
VAPA-201ENST00000340541 AADACL4Q5VUY2 407 aa13.02□□□□□ -0.33
VAPA-201ENST00000340541 RHOUQ7L0Q8 258 aa13.02□□□□□ -0.33
VAPA-201ENST00000340541 BCDIN3DQ7Z5W3 292 aaKnown RBP13.02□□□□□ -0.33
VAPA-201ENST00000340541 CLDND2Q8NHS1 167 aa13.02□□□□□ -0.33
VAPA-201ENST00000340541 ZNF582Q96NG8 517 aaPredicted RBP13.02□□□□□ -0.33
VAPA-201ENST00000340541 TEAD3Q99594 435 aa13.02□□□□□ -0.33
VAPA-201ENST00000340541 SLC30A2Q9BRI3 323 aa13.02□□□□□ -0.33
VAPA-201ENST00000340541 EGLN1Q9GZT9 426 aa13.02□□□□□ -0.33
VAPA-201ENST00000340541 DCAF16Q9NXF7 216 aa13.02□□□□□ -0.33
VAPA-201ENST00000340541 TREM2Q9NZC2 230 aa13.02□□□□□ -0.33
VAPA-201ENST00000340541 H0YL77 283 aa13.01□□□□□ -0.33
VAPA-201ENST00000340541 TGFAP01135 160 aa13.01□□□□□ -0.33
VAPA-201ENST00000340541 ALPLP05186 524 aa13.01□□□□□ -0.33
VAPA-201ENST00000340541 ALOX5APP20292 161 aa13.01□□□□□ -0.33
VAPA-201ENST00000340541 SLC15A1P46059 708 aa13.01□□□□□ -0.33
VAPA-201ENST00000340541 RPS7P62081 194 aaKnown RBP13.01□□□□□ -0.33
VAPA-201ENST00000340541 GRB2P62993 217 aaKnown RBP13.01□□□□□ -0.33
VAPA-201ENST00000340541 MALLQ13021 153 aa13.01□□□□□ -0.33
VAPA-201ENST00000340541 TAF13Q15543 124 aa13.01□□□□□ -0.33
VAPA-201ENST00000340541 HFEQ30201 348 aa13.01□□□□□ -0.33
VAPA-201ENST00000340541 AVPI1Q5T686 147 aa13.01□□□□□ -0.33
VAPA-201ENST00000340541 LIPNQ5VXI9 398 aa13.01□□□□□ -0.33
VAPA-201ENST00000340541 PGAP1Q75T13 922 aa13.01□□□□□ -0.33
VAPA-201ENST00000340541 TCEANCQ8N8B7 351 aa13.01□□□□□ -0.33
VAPA-201ENST00000340541 ZNF454Q8N9F8 522 aa13.01□□□□□ -0.33
VAPA-201ENST00000340541 BHLHE23Q8NDY6 225 aa13.01□□□□□ -0.33
VAPA-201ENST00000340541 OR2AE1Q8NHA4 323 aa13.01□□□□□ -0.33
VAPA-201ENST00000340541 TMEM163Q8TC26 289 aa13.01□□□□□ -0.33
VAPA-201ENST00000340541 RBM4BQ9BQ04 359 aaKnown RBP13.01□□□□□ -0.33
VAPA-201ENST00000340541 PRRG3Q9BZD7 231 aa13.01□□□□□ -0.33
VAPA-201ENST00000340541 TOR3AQ9H497 397 aa13.01□□□□□ -0.33
VAPA-201ENST00000340541 IL19Q9UHD0 177 aa13.01□□□□□ -0.33
VAPA-201ENST00000340541 ENOPH1Q9UHY7 261 aa13.01□□□□□ -0.33
VAPA-201ENST00000340541 LYNP07948 512 aa13□□□□□ -0.33
VAPA-201ENST00000340541 SELEP16581 610 aa13□□□□□ -0.33
VAPA-201ENST00000340541 CX3CR1P49238 355 aa13□□□□□ -0.33
VAPA-201ENST00000340541 HCCSP53701 268 aa13□□□□□ -0.33
VAPA-201ENST00000340541 LMO4P61968 165 aa13□□□□□ -0.33
VAPA-201ENST00000340541 MVKQ03426 396 aa13□□□□□ -0.33
VAPA-201ENST00000340541 SLC16A9Q7RTY1 509 aa13□□□□□ -0.33
VAPA-201ENST00000340541 ZNF283Q8N7M2 679 aa13□□□□□ -0.33
VAPA-201ENST00000340541 OR10AD1Q8NGE0 317 aa13□□□□□ -0.33
VAPA-201ENST00000340541 OR13G1Q8NGZ3 307 aa13□□□□□ -0.33
VAPA-201ENST00000340541 ITLN1Q8WWA0 313 aa13□□□□□ -0.33
VAPA-201ENST00000340541 CCL17Q92583 94 aa13□□□□□ -0.33
VAPA-201ENST00000340541 SPSB4Q96A44 273 aa13□□□□□ -0.33
VAPA-201ENST00000340541 OR2V2Q96R30 315 aa13□□□□□ -0.33
VAPA-201ENST00000340541 YIPF3Q9GZM5 350 aa13□□□□□ -0.33
VAPA-201ENST00000340541 NARFLQ9H6Q4 476 aa13□□□□□ -0.33
VAPA-201ENST00000340541 S100A14Q9HCY8 104 aa13□□□□□ -0.33
VAPA-201ENST00000340541 USE1Q9NZ43 259 aa13□□□□□ -0.33
VAPA-201ENST00000340541 ZNF319Q9P2F9 582 aa13□□□□□ -0.33
VAPA-201ENST00000340541 WIPI2Q9Y4P8 454 aa13□□□□□ -0.33
VAPA-201ENST00000340541 CD300LBA8K4G0 201 aa12.99□□□□□ -0.33
VAPA-201ENST00000340541 PRR32B1ATL7 298 aa12.99□□□□□ -0.33
VAPA-201ENST00000340541 CLDN25C9JDP6 229 aa12.99□□□□□ -0.33
VAPA-201ENST00000340541 E9PQ18 207 aa12.99□□□□□ -0.33
VAPA-201ENST00000340541 EI24O14681 340 aa12.99□□□□□ -0.33
VAPA-201ENST00000340541 HLA-DPB1P04440 258 aa12.99□□□□□ -0.33
VAPA-201ENST00000340541 MRPL3P09001 348 aaKnown RBP12.99□□□□□ -0.33
VAPA-201ENST00000340541 TNFRSF1AP19438 455 aa12.99□□□□□ -0.33
VAPA-201ENST00000340541 TNFSF4P23510 183 aa12.99□□□□□ -0.33
VAPA-201ENST00000340541 HSD11B1P28845 292 aa12.99□□□□□ -0.33
VAPA-201ENST00000340541 CDH15P55291 814 aa12.99□□□□□ -0.33
VAPA-201ENST00000340541 ZNF121P58317 390 aaPredicted RBP12.99□□□□□ -0.33
VAPA-201ENST00000340541 NXNL2Q5VZ03 156 aa12.99□□□□□ -0.33
VAPA-201ENST00000340541 MEPCEQ7L2J0 689 aaKnown RBP12.99□□□□□ -0.33
VAPA-201ENST00000340541 MRPL21Q7Z2W9 205 aaKnown RBP12.99□□□□□ -0.33
VAPA-201ENST00000340541 THEM6Q8WUY1 208 aa12.99□□□□□ -0.33
VAPA-201ENST00000340541 MEGF10Q96KG7 1140 aa12.99□□□□□ -0.33
VAPA-201ENST00000340541 RAB3IPQ96QF0 476 aaPredicted RBP12.99□□□□□ -0.33
VAPA-201ENST00000340541 SIGLEC11Q96RL6 698 aa12.99□□□□□ -0.33
VAPA-201ENST00000340541 IL4I1Q96RQ9 567 aa12.99□□□□□ -0.33
VAPA-201ENST00000340541 C19orf24Q9BVV8 132 aa12.99□□□□□ -0.33
VAPA-201ENST00000340541 RIBC2Q9H4K1 309 aa12.99□□□□□ -0.33
VAPA-201ENST00000340541 TMEM100Q9NV29 134 aa12.99□□□□□ -0.33
VAPA-201ENST00000340541 FAM157AC9JC47 383 aa12.98□□□□□ -0.33
VAPA-201ENST00000340541 F5H5P2 479 aa12.98□□□□□ -0.33
VAPA-201ENST00000340541 XRCC2O43543 280 aa12.98□□□□□ -0.33
VAPA-201ENST00000340541 H2BFMP0C1H6 154 aa12.98□□□□□ -0.33
VAPA-201ENST00000340541 LCN1P1Q5VSP4 162 aa12.98□□□□□ -0.33
VAPA-201ENST00000340541 LRRN1Q6UXK5 716 aa12.98□□□□□ -0.33
VAPA-201ENST00000340541 C10orf67Q8IYJ2 551 aa12.98□□□□□ -0.33
VAPA-201ENST00000340541 RFLNBQ8N5W9 214 aa12.98□□□□□ -0.33
VAPA-201ENST00000340541 LINC01356Q8N9X3 169 aa12.98□□□□□ -0.33
VAPA-201ENST00000340541 SGK3Q96BR1 496 aa12.98□□□□□ -0.33
VAPA-201ENST00000340541 GCM1Q9NP62 436 aa12.98□□□□□ -0.33
VAPA-201ENST00000340541 TMEM106BQ9NUM4 274 aa12.98□□□□□ -0.33
VAPA-201ENST00000340541 DNAJC27Q9NZQ0 273 aa12.98□□□□□ -0.33
VAPA-201ENST00000340541 COPS3Q9UNS2 423 aa12.98□□□□□ -0.33
VAPA-201ENST00000340541 N6AMT1Q9Y5N5 214 aa12.98□□□□□ -0.33
VAPA-201ENST00000340541 SVEP1Q4LDE5 3571 aa12.97□□□□□ -0.33
VAPA-201ENST00000340541 APOC1P02654 83 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms