RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 DEFB134Q4QY38 66 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 TTLL10Q6ZVT0 673 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 JAGN1Q8N5M9 183 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 ZNF615Q8N8J6 731 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 ZNF610Q8N9Z0 462 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 DTWD2Q8NBA8 298 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 TMEM52Q8NDY8 209 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 OR5T3Q8NGG3 340 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 RSC1A1Q92681 617 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 HOXB13Q92826 284 aaPredicted RBP8.39□□□□□ -1.07
NECAP1-201ENST00000339754 MOGAT1Q96PD6 335 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 SMOC1Q9H4F8 434 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 BCO1Q9HAY6 547 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 CAPN10Q9HC96 672 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.39□□□□□ -1.07
NECAP1-201ENST00000339754 GSKIPQ9P0R6 139 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 FBXL17Q9UF56 701 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 RAB22AQ9UL26 194 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 MMP24Q9Y5R2 645 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 ALPK2Q86TB3 2170 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 MPDZO75970 2070 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 MEGF11A6BM72 1044 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 GRXCR1A8MXD5 290 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 TSTD3H0UI37 97 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 ZNF354AO60765 605 aaPredicted RBP8.39□□□□□ -1.07
NECAP1-201ENST00000339754 PRNPP04156 253 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 CXCL1P09341 107 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 DANCRP0C864 163 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 TBPP20226 339 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 RPL12P30050 165 aaKnown RBP8.39□□□□□ -1.07
NECAP1-201ENST00000339754 RAB4BP61018 213 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 ALG10Q5BKT4 473 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 TMEM184AQ6ZMB5 413 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 SLC35D2Q76EJ3 337 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 TMEFF1Q8IYR6 380 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 CHST4Q8NCG5 386 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 OR2I1PQ8NGU4 316 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 SERINC2Q96SA4 455 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 RTBDNQ9BSG5 229 aaPredicted RBP8.39□□□□□ -1.07
NECAP1-201ENST00000339754 ARV1Q9H2C2 271 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 METTL8Q9H825 291 aaKnown RBP8.39□□□□□ -1.07
NECAP1-201ENST00000339754 KCNJ16Q9NPI9 418 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 GDE1Q9NZC3 331 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 B9D1Q9UPM9 204 aa8.39□□□□□ -1.07
NECAP1-201ENST00000339754 ZNF726A6NNF4 738 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 ZNF727A8MUV8 499 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 MKRN2OSH3BPM6 223 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 MASP2O00187 686 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 PET100P0DJ07 73 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 OR13C7P0DN81 318 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 GNB3P16520 340 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 PI3P19957 117 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 TLX1P31314 330 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-201ENST00000339754 FCGR2CP31995 323 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 CCR2P41597 374 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 GRK6P43250 576 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 FHITP49789 147 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 NPY4RP50391 375 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 TMEM33P57088 247 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 S100A10P60903 97 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 QRFPP83859 136 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 PSG6Q00889 435 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 UNC119Q13432 240 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 ZNF74Q16587 644 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 PTCRAQ6ISU1 281 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-201ENST00000339754 FBXO42Q6P3S6 717 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 ZNF679Q8IYX0 411 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 KDM8Q8N371 416 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 SEMA6DQ8NFY4 1073 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 OR4K15Q8NH41 348 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 NT5CQ8TCD5 201 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 LIPHQ8WWY8 451 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 CTHRC1Q96CG8 243 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 TSPAN32Q96QS1 320 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 CNTNAP3Q9BZ76 1288 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 FAM212BQ9NTI7 297 aaPredicted RBP8.38□□□□□ -1.07
NECAP1-201ENST00000339754 KIF26BQ2KJY2 2108 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 LAMA3Q16787 3333 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 FOXS1O43638 330 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 RAMP1O60894 148 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 PCCBP05166 539 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 CMPK1P30085 196 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 ELOBQ15370 118 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 ZNF141Q15928 474 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 C14orf28Q4W4Y0 310 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 RPUSD3Q6P087 351 aaKnown RBP8.38□□□□□ -1.07
NECAP1-201ENST00000339754 DGAT2L6Q6ZPD8 337 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 RNF44Q7L0R7 432 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 CATSPERDQ86XM0 798 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 FOXRED2Q8IWF2 684 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 ZCCHC10Q8TBK6 192 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 Q8WTZ3 238 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 FAM46BQ96A09 425 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 RAB11FIP5Q9BXF6 653 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 MRPL37Q9BZE1 423 aaKnown RBP8.38□□□□□ -1.07
NECAP1-201ENST00000339754 GRHPRQ9UBQ7 328 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 FBXO7Q9Y3I1 522 aa8.38□□□□□ -1.07
NECAP1-201ENST00000339754 PUS1Q9Y606 427 aaKnown RBP eCLIP8.38□□□□□ -1.07
NECAP1-201ENST00000339754 ELOA3CA0A087WX78 387 aaPredicted RBP8.37□□□□□ -1.07
NECAP1-201ENST00000339754 OR5H15A6NDH6 313 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms