RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 A0A096LPE4 126 aa19.64■□□□□ 0.73
PDLIM2-203ENST00000339162 LOC100289279A0A1B0GTE1 492 aa19.64■□□□□ 0.73
PDLIM2-203ENST00000339162 A0A1W2PPZ6 126 aa19.64■□□□□ 0.73
PDLIM2-203ENST00000339162 MEGF11A6BM72 1044 aa19.64■□□□□ 0.73
PDLIM2-203ENST00000339162 SYNGR3O43761 229 aa19.64■□□□□ 0.73
PDLIM2-203ENST00000339162 KDM4BO94953 1096 aa19.64■□□□□ 0.73
PDLIM2-203ENST00000339162 YES1P07947 543 aa19.64■□□□□ 0.73
PDLIM2-203ENST00000339162 ARSBP15848 533 aa19.64■□□□□ 0.73
PDLIM2-203ENST00000339162 BDKRB2P30411 391 aa19.64■□□□□ 0.73
PDLIM2-203ENST00000339162 OTX1P32242 354 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-203ENST00000339162 PSG4Q00888 419 aa19.64■□□□□ 0.73
PDLIM2-203ENST00000339162 SNAI3Q3KNW1 292 aa19.64■□□□□ 0.73
PDLIM2-203ENST00000339162 BAIAP2L2Q6UXY1 529 aa19.64■□□□□ 0.73
PDLIM2-203ENST00000339162 NUFIP2Q7Z417 695 aaKnown RBP19.64■□□□□ 0.73
PDLIM2-203ENST00000339162 MCEMP1Q8IX19 187 aa19.64■□□□□ 0.73
PDLIM2-203ENST00000339162 HPS1Q92902 700 aa19.64■□□□□ 0.73
PDLIM2-203ENST00000339162 BCO1Q9HAY6 547 aa19.64■□□□□ 0.73
PDLIM2-203ENST00000339162 PARPBPQ9NWS1 579 aa19.64■□□□□ 0.73
PDLIM2-203ENST00000339162 HGFACQ04756 655 aa19.63■□□□□ 0.73
PDLIM2-203ENST00000339162 RAB35Q15286 201 aa19.63■□□□□ 0.73
PDLIM2-203ENST00000339162 TOMM5Q8N4H5 51 aa19.63■□□□□ 0.73
PDLIM2-203ENST00000339162 OR52I2Q8NH67 350 aa19.63■□□□□ 0.73
PDLIM2-203ENST00000339162 SMIM4Q8WVI0 70 aa19.63■□□□□ 0.73
PDLIM2-203ENST00000339162 SPTSSAQ969W0 71 aa19.63■□□□□ 0.73
PDLIM2-203ENST00000339162 CNTD2Q9H8S5 307 aa19.63■□□□□ 0.73
PDLIM2-203ENST00000339162 SLC17A5Q9NRA2 495 aa19.63■□□□□ 0.73
PDLIM2-203ENST00000339162 CTAG2O75638 210 aa19.63■□□□□ 0.73
PDLIM2-203ENST00000339162 FAM157BP0CG42 384 aa19.63■□□□□ 0.73
PDLIM2-203ENST00000339162 TAS2R20P59543 309 aa19.63■□□□□ 0.73
PDLIM2-203ENST00000339162 ARF1P84077 181 aaKnown RBP19.63■□□□□ 0.73
PDLIM2-203ENST00000339162 LYPD6Q86Y78 171 aa19.63■□□□□ 0.73
PDLIM2-203ENST00000339162 SIAH3Q8IW03 269 aa19.63■□□□□ 0.73
PDLIM2-203ENST00000339162 OR6M1Q8NGM8 313 aa19.63■□□□□ 0.73
PDLIM2-203ENST00000339162 C12orf49Q9H741 205 aa19.63■□□□□ 0.73
PDLIM2-203ENST00000339162 TMEM138Q9NPI0 162 aa19.63■□□□□ 0.73
PDLIM2-203ENST00000339162 TRAV17A0A0B4J275 112 aa19.62■□□□□ 0.73
PDLIM2-203ENST00000339162 RAB3AP20336 220 aa19.62■□□□□ 0.73
PDLIM2-203ENST00000339162 CRYGSP22914 178 aa19.62■□□□□ 0.73
PDLIM2-203ENST00000339162 PRSS12P56730 875 aa19.62■□□□□ 0.73
PDLIM2-203ENST00000339162 SCRN3Q0VDG4 424 aa19.62■□□□□ 0.73
PDLIM2-203ENST00000339162 DOK3Q7L591 496 aa19.62■□□□□ 0.73
PDLIM2-203ENST00000339162 OR1F12Q8NHA8 337 aa19.62■□□□□ 0.73
PDLIM2-203ENST00000339162 PLEKHA1Q9HB21 404 aa19.62■□□□□ 0.73
PDLIM2-203ENST00000339162 KLK11Q9UBX7 282 aa19.62■□□□□ 0.73
PDLIM2-203ENST00000339162 CACNG2Q9Y698 323 aa19.62■□□□□ 0.73
PDLIM2-203ENST00000339162 TNRC6AQ8NDV7 1962 aaKnown RBP19.62■□□□□ 0.73
PDLIM2-203ENST00000339162 ORC5O43913 435 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 CPN1P15169 458 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 CCL1P22362 96 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 GDNFP39905 211 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 HTR5AP47898 357 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 ANKRD16Q6P6B7 361 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 PLET1Q6UQ28 207 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 NKAIN3Q8N8D7 197 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 OR14K1Q8NGZ2 314 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 APH1AQ96BI3 265 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 OR2H1Q9GZK4 316 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 WNT5BQ9H1J7 359 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 RHBDD3Q9Y3P4 386 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 TIMM10BQ9Y5J6 103 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 MEIOCA2RUB1 952 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 ZNF724A8MTY0 619 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 CTDSPLO15194 276 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 CD37P11049 281 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 SDHBP21912 280 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 SCAND1P57086 179 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 FAPQ12884 760 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 FOXC1Q12948 553 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 RNPS1Q15287 305 aaKnown RBP19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 OR2AE1Q8NHA4 323 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 ATG5Q9H1Y0 275 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 RNF121Q9H920 327 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 UPB1Q9UBR1 384 aa19.61■□□□□ 0.73
PDLIM2-203ENST00000339162 LOC390937A0A1W2PQ73 354 aa19.6■□□□□ 0.73
PDLIM2-203ENST00000339162 SLC22A20A6NK97 555 aa19.6■□□□□ 0.73
PDLIM2-203ENST00000339162 GSTZ1O43708 216 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-203ENST00000339162 RSBN1Q5VWQ0 802 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-203ENST00000339162 ZNF100Q8IYN0 542 aa19.6■□□□□ 0.73
PDLIM2-203ENST00000339162 UPRTQ96BW1 309 aa19.6■□□□□ 0.73
PDLIM2-203ENST00000339162 SORCS2Q96PQ0 1159 aa19.6■□□□□ 0.73
PDLIM2-203ENST00000339162 LINC00470Q9BZP3 86 aa19.6■□□□□ 0.73
PDLIM2-203ENST00000339162 A0A0B4J293 547 aa19.6■□□□□ 0.73
PDLIM2-203ENST00000339162 ZNF587BE7ETH6 402 aa19.6■□□□□ 0.73
PDLIM2-203ENST00000339162 XRCC3O43542 346 aa19.6■□□□□ 0.73
PDLIM2-203ENST00000339162 CEACAM4O75871 244 aa19.6■□□□□ 0.73
PDLIM2-203ENST00000339162 C1orf100Q5SVJ3 147 aa19.6■□□□□ 0.73
PDLIM2-203ENST00000339162 ZNF529Q6P280 563 aa19.6■□□□□ 0.73
PDLIM2-203ENST00000339162 DUSP18Q8NEJ0 188 aa19.6■□□□□ 0.73
PDLIM2-203ENST00000339162 ZC3HAV1LQ96H79 300 aaKnown RBP19.6■□□□□ 0.73
PDLIM2-203ENST00000339162 PRSS50Q9UI38 385 aa19.6■□□□□ 0.73
PDLIM2-203ENST00000339162 DMXL2Q8TDJ6 3036 aa19.6■□□□□ 0.73
PDLIM2-203ENST00000339162 FARS2O95363 451 aaKnown RBP19.59■□□□□ 0.73
PDLIM2-203ENST00000339162 IGLV3-1P01715 115 aa19.59■□□□□ 0.73
PDLIM2-203ENST00000339162 BTCP35070 178 aa19.59■□□□□ 0.73
PDLIM2-203ENST00000339162 RAB25P57735 213 aa19.59■□□□□ 0.73
PDLIM2-203ENST00000339162 OR5AS1Q8N127 324 aa19.59■□□□□ 0.73
PDLIM2-203ENST00000339162 ZNF224Q9NZL3 707 aa19.59■□□□□ 0.73
PDLIM2-203ENST00000339162 TRAV18A0A075B6X5 111 aa19.59■□□□□ 0.73
PDLIM2-203ENST00000339162 OR6C6A6NF89 314 aa19.59■□□□□ 0.73
PDLIM2-203ENST00000339162 GGT3PA6NGU5 568 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms