RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 CDK5R2Q13319 367 aa13.46□□□□□ -0.25
MRPL55-202ENST00000336300 TIGD6Q17RP2 521 aa13.46□□□□□ -0.25
MRPL55-202ENST00000336300 SNAI3Q3KNW1 292 aa13.46□□□□□ -0.25
MRPL55-202ENST00000336300 LRRN1Q6UXK5 716 aa13.46□□□□□ -0.25
MRPL55-202ENST00000336300 ZNF679Q8IYX0 411 aa13.46□□□□□ -0.25
MRPL55-202ENST00000336300 OR2Z1Q8NG97 314 aa13.46□□□□□ -0.25
MRPL55-202ENST00000336300 OR2T27Q8NH04 317 aa13.46□□□□□ -0.25
MRPL55-202ENST00000336300 PGAM5Q96HS1 289 aa13.46□□□□□ -0.25
MRPL55-202ENST00000336300 APOL4Q9BPW4 351 aa13.46□□□□□ -0.25
MRPL55-202ENST00000336300 SLC22A4Q9H015 551 aa13.46□□□□□ -0.25
MRPL55-202ENST00000336300 ADGRL4Q9HBW9 690 aa13.46□□□□□ -0.25
MRPL55-202ENST00000336300 BRD7Q9NPI1 651 aa13.46□□□□□ -0.25
MRPL55-202ENST00000336300 TMEM100Q9NV29 134 aa13.46□□□□□ -0.25
MRPL55-202ENST00000336300 IKZF2Q9UKS7 526 aa13.46□□□□□ -0.25
MRPL55-202ENST00000336300 F8P00451 2351 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 IGHV1-69-2A0A0G2JMI3 117 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 ZSCAN5BA6NJL1 495 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 ACOD1A6NK06 481 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 SLC16A6O15403 523 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 CD55P08174 381 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 USF1P22415 310 aaPredicted RBP13.45□□□□□ -0.26
MRPL55-202ENST00000336300 GIFP27352 417 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 DCTDP32321 178 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 CRYBB2P43320 205 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 NR4A2P43354 598 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 MTNR1AP48039 350 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 RIDAP52758 137 aaKnown RBP13.45□□□□□ -0.26
MRPL55-202ENST00000336300 CXCR4P61073 352 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 TNFAIP6P98066 277 aaPredicted RBP13.45□□□□□ -0.26
MRPL55-202ENST00000336300 ZNF92Q03936 586 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 EGR3Q06889 387 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 OCLNQ16625 522 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 HFEQ30201 348 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 GLYATL3Q5SZD4 288 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 TTC23Q5W5X9 447 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 LPCAT4Q643R3 524 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 ZNF322Q6U7Q0 402 aaPredicted RBP13.45□□□□□ -0.26
MRPL55-202ENST00000336300 FAM57BQ71RH2 274 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 CIARTQ8N365 385 aaPredicted RBP13.45□□□□□ -0.26
MRPL55-202ENST00000336300 BHLHE23Q8NDY6 225 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 GTF3AQ92664 365 aaKnown RBP13.45□□□□□ -0.26
MRPL55-202ENST00000336300 MYCBPQ99417 103 aaPredicted RBP13.45□□□□□ -0.26
MRPL55-202ENST00000336300 REPIN1Q9BWE0 567 aaKnown RBP13.45□□□□□ -0.26
MRPL55-202ENST00000336300 RGCCQ9H4X1 137 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 IL19Q9UHD0 177 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 LRP12Q9Y561 859 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 PCDHGB1Q9Y5G3 927 aa13.45□□□□□ -0.26
MRPL55-202ENST00000336300 TMEM269A0A1B0GVZ9 245 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 E9PQ18 207 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 LYNX1G3V0Z9 82 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 CDC14BO60729 498 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 ENTPD6O75354 484 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 NCR1O76036 304 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 LYNX1P0DP58 116 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 COL8A2P25067 703 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 PEX2P28328 305 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 DDOSTP39656 456 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 PSMA6P60900 246 aaKnown RBP13.44□□□□□ -0.26
MRPL55-202ENST00000336300 ROM1Q03395 351 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 SLC3A1Q07837 685 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 LOXL1Q08397 574 aaPredicted RBP13.44□□□□□ -0.26
MRPL55-202ENST00000336300 SNCBQ16143 134 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 ZNF829Q3KNS6 432 aaPredicted RBP13.44□□□□□ -0.26
MRPL55-202ENST00000336300 TMEM255AQ5JRV8 349 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 OR10H4Q8NGA5 316 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 OR2AE1Q8NHA4 323 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 UBE2FQ969M7 185 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 REEP6Q96HR9 211 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 OR8B4Q96RC9 309 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 SLC30A2Q9BRI3 323 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 ZNF391Q9UJN7 358 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 KLHDC2Q9Y2U9 406 aa13.44□□□□□ -0.26
MRPL55-202ENST00000336300 FLNAP21333 2647 aaKnown RBP13.44□□□□□ -0.26
MRPL55-202ENST00000336300 CD300LBA8K4G0 201 aa13.43□□□□□ -0.26
MRPL55-202ENST00000336300 VWC2LB2RUY7 222 aa13.43□□□□□ -0.26
MRPL55-202ENST00000336300 PSMD9O00233 223 aa13.43□□□□□ -0.26
MRPL55-202ENST00000336300 CASQ2O14958 399 aaPredicted RBP13.43□□□□□ -0.26
MRPL55-202ENST00000336300 KRT8P05787 483 aa13.43□□□□□ -0.26
MRPL55-202ENST00000336300 GPR6P46095 362 aaPredicted RBP13.43□□□□□ -0.26
MRPL55-202ENST00000336300 SRP9P49458 86 aaKnown RBP13.43□□□□□ -0.26
MRPL55-202ENST00000336300 SLC34A1Q06495 639 aa13.43□□□□□ -0.26
MRPL55-202ENST00000336300 MZT1Q08AG7 82 aa13.43□□□□□ -0.26
MRPL55-202ENST00000336300 GFOD2Q3B7J2 385 aa13.43□□□□□ -0.26
MRPL55-202ENST00000336300 CLEC9AQ6UXN8 241 aa13.43□□□□□ -0.26
MRPL55-202ENST00000336300 PEG10Q86TG7 708 aaKnown RBP13.43□□□□□ -0.26
MRPL55-202ENST00000336300 ENTHD1Q8IYW4 607 aa13.43□□□□□ -0.26
MRPL55-202ENST00000336300 FTMTQ8N4E7 242 aa13.43□□□□□ -0.26
MRPL55-202ENST00000336300 DHRSXQ8N5I4 330 aa13.43□□□□□ -0.26
MRPL55-202ENST00000336300 RHOXF1Q8NHV9 184 aa13.43□□□□□ -0.26
MRPL55-202ENST00000336300 CYGBQ8WWM9 190 aa13.43□□□□□ -0.26
MRPL55-202ENST00000336300 CCL17Q92583 94 aa13.43□□□□□ -0.26
MRPL55-202ENST00000336300 SPSB4Q96A44 273 aa13.43□□□□□ -0.26
MRPL55-202ENST00000336300 SGK3Q96BR1 496 aa13.43□□□□□ -0.26
MRPL55-202ENST00000336300 RNFT2Q96EX2 444 aa13.43□□□□□ -0.26
MRPL55-202ENST00000336300 TIMD4Q96H15 378 aa13.43□□□□□ -0.26
MRPL55-202ENST00000336300 BPESC1Q9GZL8 116 aa13.43□□□□□ -0.26
MRPL55-202ENST00000336300 COPS3Q9UNS2 423 aa13.43□□□□□ -0.26
MRPL55-202ENST00000336300 MED13LQ71F56 2210 aa13.42□□□□□ -0.26
MRPL55-202ENST00000336300 ANKRD30BLA7E2S9 258 aa13.42□□□□□ -0.26
MRPL55-202ENST00000336300 PPIHO43447 177 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms