RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 LOC102724200A0A096LPH7 203 aaPredicted RBP7.74□□□□□ -1.17
TDP1-201ENST00000335725 A0A1W2PRS3 328 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 OPRD1P41143 372 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 CKS1BP61024 79 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 REEP3Q6NUK4 255 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 RPL22L1Q6P5R6 122 aaKnown RBP7.74□□□□□ -1.17
TDP1-201ENST00000335725 VASH2Q86V25 355 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 ZNF429Q86V71 674 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 SPNS2Q8IVW8 549 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 MAL2Q969L2 176 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 CABLES2Q9BTV7 478 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 SCRT1Q9BWW7 348 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 G6PC2Q9NQR9 355 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 ZNF860A6NHJ4 632 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 TLX3O43711 291 aaPredicted RBP7.74□□□□□ -1.17
TDP1-201ENST00000335725 CCL2P13500 99 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 COX7A2P14406 83 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 ZNF19P17023 458 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 NSG1P42857 185 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 DCAF7P61962 342 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 PNRC1Q12796 327 aaPredicted RBP7.74□□□□□ -1.17
TDP1-201ENST00000335725 ELOA3BQ3SY89 546 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 ZNF66Q6ZN08 573 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 ZSCAN4Q8NAM6 433 aaPredicted RBP7.74□□□□□ -1.17
TDP1-201ENST00000335725 ELOA3Q8NG57 546 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 OR2T27Q8NH04 317 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 SLC17A5Q9NRA2 495 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 ZNF586Q9NXT0 402 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 GULP1Q9UBP9 304 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 SLC7A7Q9UM01 511 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 PAM16Q9Y3D7 125 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 WIPI2Q9Y4P8 454 aa7.74□□□□□ -1.17
TDP1-201ENST00000335725 DAPL1A0PJW8 107 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 CDHR4A6H8M9 788 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 FAM166BA8MTA8 275 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 F5H5T6 163 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 GCM2O75603 506 aaPredicted RBP7.73□□□□□ -1.17
TDP1-201ENST00000335725 AKR1C4P17516 323 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 CDK2P24941 298 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 S100GP29377 79 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 RAB38P57729 211 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 IL2P60568 153 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 RPL23AP62750 156 aaKnown RBP7.73□□□□□ -1.17
TDP1-201ENST00000335725 TLE3Q04726 772 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 BAXQ07812 192 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 SLC25A52Q3SY17 297 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 LEG1Q6P5S2 330 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 TGIF2LYQ8IUE0 185 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 OR5K2Q8NHB8 316 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 MIB2Q96AX9 1013 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 SLC46A1Q96NT5 459 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 SSBP4Q9BWG4 385 aaPredicted RBP7.73□□□□□ -1.17
TDP1-201ENST00000335725 CTDSP1Q9GZU7 261 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 SMG9Q9H0W8 520 aaKnown RBP7.73□□□□□ -1.17
TDP1-201ENST00000335725 NRIP3Q9NQ35 241 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 TBC1D29Q9UFV1 150 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 AK6Q9Y3D8 172 aaKnown RBP7.73□□□□□ -1.17
TDP1-201ENST00000335725 ARL5CA6NH57 179 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 G3V4G9 280 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 CD160O95971 181 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 PSG1P11464 419 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 GLB1P16278 677 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 ARL3P36405 182 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 TRIM40Q6P9F5 258 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 DEFB128Q7Z7B8 93 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 MRGPREQ86SM8 312 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 DND1Q8IYX4 353 aaKnown RBP7.73□□□□□ -1.17
TDP1-201ENST00000335725 KLHDC1Q8N7A1 406 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 OR6K2Q8NGY2 324 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 HIF1ANQ9NWT6 349 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 FNDC1Q4ZHG4 1894 aaPredicted RBP7.73□□□□□ -1.17
TDP1-201ENST00000335725 ALPK3Q96L96 1907 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 FAM227AF5H4B4 570 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 SOCS6O14544 535 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 DRD1P21728 446 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 BIDP55957 195 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 PLPPR5Q32ZL2 321 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 UNQ5815/PRO19632Q6UWF5 114 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 ZNF280BQ86YH2 543 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 TP53INP2Q8IXH6 220 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 SLC25A43Q8WUT9 341 aaPredicted RBP7.73□□□□□ -1.17
TDP1-201ENST00000335725 TMEM170AQ8WVE7 144 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 ZBTB45Q96K62 511 aaPredicted RBP7.73□□□□□ -1.17
TDP1-201ENST00000335725 PTPN18Q99952 460 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 RAB11FIP5Q9BXF6 653 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 TPSD1Q9BZJ3 242 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 ZDHHC6Q9H6R6 413 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 WFDC1Q9HC57 220 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 CNIH4Q9P003 139 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 ABI3Q9P2A4 366 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 ZNF319Q9P2F9 582 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 KCNK6Q9Y257 313 aa7.73□□□□□ -1.17
TDP1-201ENST00000335725 LRATO95237 230 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 LYL1P12980 280 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 HNRNPA2B1P22626 353 aaKnown RBP7.72□□□□□ -1.17
TDP1-201ENST00000335725 DPP4P27487 766 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 CEACAM3P40198 252 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 ID4P47928 161 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 FOXL2P58012 376 aa7.72□□□□□ -1.17
TDP1-201ENST00000335725 SNRPD1P62314 119 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms