RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 ZNF595Q8IYB9 648 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 PRSS3P2Q8NHM4 247 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 MBD3L1Q8WWY6 194 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 CLEC4DQ8WXI8 215 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 COMMD5Q9GZQ3 224 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 CLEC2DQ9UHP7 191 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 P2RY10O00398 339 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 RHBDL1O75783 438 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 WNT11O96014 354 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 SIX1Q15475 284 aaPredicted RBP5.65□□□□□ -1.51
CSMD1-201ENST00000335551 TRMT12Q53H54 448 aaKnown RBP5.65□□□□□ -1.51
CSMD1-201ENST00000335551 GDF7Q7Z4P5 450 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 NLGN4XQ8N0W4 816 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 OR52L2PQ8NGH6 319 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 TRAF4Q9BUZ4 470 aaPredicted RBP5.65□□□□□ -1.51
CSMD1-201ENST00000335551 SH2D7A6NKC9 451 aaPredicted RBP5.65□□□□□ -1.51
CSMD1-201ENST00000335551 HMSDA8MTL9 139 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 SSX1Q16384 188 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 ACKR1Q16570 336 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 FCRL6Q6DN72 434 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 LHFPL2Q6ZUX7 228 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 OR2T10Q8NGZ9 312 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 OR2T6Q8NHC8 308 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 LINC00597Q9H2U6 94 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 FKBP11Q9NYL4 201 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 EMCNQ9ULC0 261 aa5.65□□□□□ -1.51
CSMD1-201ENST00000335551 MED12LQ86YW9 2145 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 CUL9Q8IWT3 2517 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 SH2D1BO14796 132 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 F13BP05160 661 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 CD14P08571 375 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 TCN2P20062 427 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 DLK1P80370 383 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 EXOSC7Q15024 291 aaKnown RBP5.64□□□□□ -1.51
CSMD1-201ENST00000335551 SHHQ15465 462 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 CGB2Q6NT52 195 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 ANGPTL5Q86XS5 388 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 VRK2Q86Y07 508 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 LILRA2Q8N149 483 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 CHST14Q8NCH0 376 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 WDR83Q9BRX9 315 aaKnown RBP5.64□□□□□ -1.51
CSMD1-201ENST00000335551 OR2J1Q9GZK6 312 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 ZNF835Q9Y2P0 537 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 PIK3C2AO00443 1686 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 NRASP01111 189 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 HRASP01112 189 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 KRASP01116 189 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 ELNP15502 786 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 FKBP2P26885 142 aaKnown RBP5.64□□□□□ -1.51
CSMD1-201ENST00000335551 TBC1D28Q2M2D7 210 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 MAML2Q8IZL2 1156 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-201ENST00000335551 C19orf47Q8N9M1 422 aaKnown RBP5.64□□□□□ -1.51
CSMD1-201ENST00000335551 MEGF10Q96KG7 1140 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 PLA2G12AQ9BZM1 189 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 CHST8Q9H2A9 424 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 UBTD1Q9HAC8 227 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 MMP24Q9Y5R2 645 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 TCRBV21S2A2A0A5A6 115 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 FAM72CH0Y354 149 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 EVX1P49640 407 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 RAB38P57729 211 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 TMEM176BQ3YBM2 270 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-201ENST00000335551 VWA2Q5GFL6 755 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 FAM72AQ5TYM5 149 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 FAM72DQ6L9T8 149 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 FAM72BQ86X60 149 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 FOXN4Q96NZ1 517 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 C19orf43Q9BQ61 176 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 CACNG4Q9UBN1 327 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 SLC17A4Q9Y2C5 497 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 A0A1W2PQU0 124 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 SPICQ8N5J4 248 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 ARL6IP6Q8N6S5 226 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 OR5AU1Q8NGC0 362 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 CA5BP1Q8WTZ4 195 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 MCHR2Q969V1 340 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 NXPE3Q969Y0 559 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 RAB37Q96AX2 223 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 WDR89Q96FK6 387 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-201ENST00000335551 DUSP21Q9H596 190 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 PRDM7Q9NQW5 492 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 TAS2R4Q9NYW5 299 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 COL1A1P02452 1464 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-201ENST00000335551 VASPP50552 380 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-201ENST00000335551 ERVFRD-1P60508 538 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 TMEM128Q5BJH2 165 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 ELFN2Q5R3F8 820 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 SLC16A13Q7RTY0 426 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 NEIL1Q96FI4 390 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-201ENST00000335551 ZNF385DQ9H6B1 395 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 LMX1BO60663 402 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 FAM87AP0C7U9 286 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 EGR3Q06889 387 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 SRSF9Q13242 221 aaKnown RBP eCLIP5.64□□□□□ -1.51
CSMD1-201ENST00000335551 AMMECR1LQ6DCA0 310 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 ADGRL4Q9HBW9 690 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 LSM2Q9Y333 95 aaKnown RBP5.64□□□□□ -1.51
CSMD1-201ENST00000335551 A0A0U1RQF3 1178 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 OR52A4PA6NMU1 304 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 IFITM5A6NNB3 132 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms