RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 NAGAP17050 411 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR8B8Q15620 311 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 TARBP2Q15633 366 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 TMEM65Q6PI78 240 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 VSIG10LQ86VR7 867 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 MUC20Q8N307 709 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR5AN1Q8NGI8 311 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 NXPE3Q969Y0 559 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 SMIM28A0A1B0GU29 152 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 TAPBPO15533 448 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 GPX5O75715 221 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 APBB3O95704 486 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 ATP5G1P05496 136 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 ADORA3P0DMS8 318 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 SSR2P43308 183 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 ATP5G3P48201 142 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 ATP5G2Q06055 141 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 CCSMST1Q4G0I0 132 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 DHRS7BQ6IAN0 325 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 DNM1P46Q6ZS02 220 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 PLPP7Q8NBV4 271 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 HJURPQ8NCD3 748 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 IL17RDQ8NFM7 739 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 TEX264Q9Y6I9 313 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 KLRC2P26717 231 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 DUSP1P28562 367 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 C21orf33P30042 268 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 SYPL2Q5VXT5 272 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 ZNF385CQ66K41 422 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 PGAM5Q96HS1 289 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 FDXACB1Q9BRP7 624 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 GGACTQ9BVM4 153 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 JAM3Q9BX67 310 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 AUNIPQ9H7T9 357 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 RETNQ9HD89 108 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 SLC6A13Q9NSD5 602 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 GIMAP2Q9UG22 337 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 TMEM150CB9EJG8 249 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 FCN3O75636 299 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 AHSGP02765 367 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 FCGR3AP08637 254 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 DUTP33316 252 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 LGALSLQ3ZCW2 172 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 MANEAQ5SRI9 462 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR13H1Q8NG92 308 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 OR5D18Q8NGL1 313 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 SLC23A2Q9UGH3 650 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 POLDIP2Q9Y2S7 368 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 FMN2Q9NZ56 1722 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 MFNGO00587 321 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 MPIG6BO95866 241 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 AGXTP21549 392 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 DRD5P21918 477 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 CNN1P51911 297 aaKnown RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 LRRC75BQ2VPJ9 315 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 ANKRD33Q7Z3H0 272 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 DPH2Q9BQC3 489 aaPredicted RBP5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 ANXA10Q9UJ72 324 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 ANKRD26Q9UPS8 1709 aa5.55□□□□□ -1.52
CDC42BPA-201ENST00000334218 SLC2A10O95528 541 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 MGAT3Q09327 533 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 GLB1LQ6UWU2 654 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 ABHD15Q6UXT9 468 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 DPPA4Q7L190 304 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 CADM3Q8N126 398 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 ZBTB45Q96K62 511 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 NKX2-4Q9H2Z4 354 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 P2RX2Q9UBL9 471 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 A0A1W2PP18 115 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 C3orf80F5H4A9 247 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 FAM72CH0Y354 149 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 DUX1O43812 170 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 ACP2P11117 423 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 CRISP3P54108 245 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 ABHD18Q0P651 414 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 FAM72DQ6L9T8 149 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 DUX5Q96PT3 197 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 MS4A7Q9GZW8 240 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 NSUN3Q9H649 340 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 HRASLSQ9HDD0 168 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 EIF3GO75821 320 aaKnown RBP eCLIP5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 ATP1B2P14415 290 aaPredicted RBP5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 KLHDC8AQ8IYD2 350 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 BOD1L2Q8IYS8 172 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 C1orf127Q8N9H9 656 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 CPEB3Q8NE35 698 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 SEH1LQ96EE3 360 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 SPATA33Q96N06 139 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 MS4A4EQ96PG1 132 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 CBLCQ9ULV8 474 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 SERTM1A2A2V5 107 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 SAP18O00422 153 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 ARPC1BO15143 372 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 GRM6O15303 877 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 EPXP11678 715 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 FOLR2P14207 255 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 SYPL1Q16563 259 aa5.54□□□□□ -1.52
CDC42BPA-201ENST00000334218 TMEM241Q24JQ0 296 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms