RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 VSIG8P0DPA2 414 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 DHPSP49366 369 aaPredicted RBP11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 CLDN6P56747 220 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 SCAND1P57086 179 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 TEX30Q5JUR7 227 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 ACOT7LQ6ZUV0 252 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 NKAIN3Q8N8D7 197 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 TMEM104Q8NE00 496 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 LHFPL5Q8TAF8 219 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 PARP12Q9H0J9 701 aaKnown RBP11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 PCDHB16Q9NRJ7 776 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 CACNA1EQ15878 2313 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 IGHV1OR21-1A0A087WYE8 117 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 LMO7DNF2Z398 122 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 RAB27BO00194 218 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 SOCS1O15524 211 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 ZNF354AO60765 605 aaPredicted RBP11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 AQP8O94778 261 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 PRKACAP17612 351 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 BCKDHBP21953 392 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 OR3A4PP47883 348 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 ROM1Q03395 351 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 SCRN3Q0VDG4 424 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 KCNK7Q9Y2U2 307 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 A0A1B0GV50 99 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 HSPB2A8KAH6 182 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 SULT1C2O00338 296 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 BCL2L11O43521 198 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 ZNF217O75362 1048 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 FBXO24O75426 580 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 F12P00748 615 aaPredicted RBP11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 CNR1P21554 472 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 MPGP29372 298 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 ZNF273Q14593 569 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 HSPB2Q16082 182 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 TMPPEQ6ZT21 453 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 MRPS24Q96EL2 167 aaKnown RBP11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 EHFQ9NZC4 300 aa11.48□□□□□ -0.57
HMGCS1-201ENST00000325110 ZDBF2Q9HCK1 2354 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 MS4A18H0YCH9 400 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 TTRP02766 147 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 CASRP41180 1078 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 DHODHQ02127 395 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 MYBPHQ13203 477 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 MFAP5Q13361 173 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 MPPED2Q15777 294 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 MS4A18Q3C1V0 323 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 ASB10Q8WXI3 467 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 PIGTQ969N2 578 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 OR6C1Q96RD1 312 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 CRB3Q9BUF7 120 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 G6PC2Q9NQR9 355 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 SLC17A5Q9NRA2 495 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 H7C2Y5 167 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 SNAPC5O75971 98 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 OR2F2O95006 317 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 GABRR1P24046 479 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 GABRA4P48169 554 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 ZNF121P58317 390 aaPredicted RBP11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 OR2F1Q13607 317 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 PTCRAQ6ISU1 281 aaPredicted RBP11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 PNLDC1Q8NA58 520 aaKnown RBP11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 ARPC5LQ9BPX5 153 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 UTP23Q9BRU9 249 aaKnown RBP11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 SLC25A32Q9H2D1 315 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 ZNF205O95201 554 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 GUSBP08236 651 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 UNC119Q13432 240 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 HSD17B13Q7Z5P4 300 aaPredicted RBP11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 WDFY1Q8IWB7 410 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 BATF2Q8N1L9 274 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 OR10G3Q8NGC4 313 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 TOMM40LQ969M1 308 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 ZNF416Q9BWM5 594 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 RBM24Q9BX46 236 aaKnown RBP11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 DEFB126Q9BYW3 111 aa11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 NKX6-2Q9C056 277 aaPredicted RBP11.47□□□□□ -0.57
HMGCS1-201ENST00000325110 IGHV3-15A0A0B4J1V0 119 aa11.46□□□□□ -0.57
HMGCS1-201ENST00000325110 TEX13DA0A0J9YY54 714 aaPredicted RBP11.46□□□□□ -0.57
HMGCS1-201ENST00000325110 OR2J2O76002 312 aa11.46□□□□□ -0.57
HMGCS1-201ENST00000325110 WDPCPO95876 746 aa11.46□□□□□ -0.57
HMGCS1-201ENST00000325110 IGHG1P01857 330 aa11.46□□□□□ -0.57
HMGCS1-201ENST00000325110 FGF2P09038 288 aa11.46□□□□□ -0.57
HMGCS1-201ENST00000325110 PSMB6P28072 239 aa11.46□□□□□ -0.57
HMGCS1-201ENST00000325110 LTBRP36941 435 aa11.46□□□□□ -0.57
HMGCS1-201ENST00000325110 PAN3Q58A45 887 aaKnown RBP11.46□□□□□ -0.57
HMGCS1-201ENST00000325110 PHF19Q5T6S3 580 aa11.46□□□□□ -0.57
HMGCS1-201ENST00000325110 TMEM71Q6P5X7 295 aa11.46□□□□□ -0.57
HMGCS1-201ENST00000325110 PEG10Q86TG7 708 aaKnown RBP11.46□□□□□ -0.57
HMGCS1-201ENST00000325110 LIN37Q96GY3 246 aaPredicted RBP11.46□□□□□ -0.57
HMGCS1-201ENST00000325110 ARHGAP5-AS1Q96IT6 56 aa11.46□□□□□ -0.57
HMGCS1-201ENST00000325110 SLC5A6Q9Y289 635 aa11.46□□□□□ -0.57
HMGCS1-201ENST00000325110 HPP00738 406 aa11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 BLVRBP30043 206 aaPredicted RBP11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 GABREP78334 506 aa11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 CHRFAM7AQ494W8 412 aa11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 KCNRGQ8N5I3 272 aa11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 ST7LQ8TDW4 575 aa11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 MARC2Q969Z3 335 aa11.46□□□□□ -0.58
HMGCS1-201ENST00000325110 URM1Q9BTM9 101 aaKnown RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms