RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 SLC6A13Q9NSD5 602 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 PCDHGA1Q9Y5H4 931 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 MMP24Q9Y5R2 645 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 RBFOX3A6NFN3 312 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 K7ERQ8 282 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 P2RY4P51582 365 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 GDF6Q6KF10 455 aaPredicted RBP6.42□□□□□ -1.38
SMC1A-201ENST00000322213 TMPRSS11FQ6ZWK6 438 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 CAMKMTQ7Z624 323 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF687Q8N1G0 1237 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 DCBLD2Q96PD2 775 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 IL17FQ96PD4 163 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 HPP00738 406 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 CCNOP22674 350 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 DPP4P27487 766 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 NCMAPQ5T1S8 102 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 PLPP4Q5VZY2 271 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 FAM103A1Q9BTL3 118 aaKnown RBP6.42□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF331Q9NQX6 463 aaPredicted RBP6.42□□□□□ -1.38
SMC1A-201ENST00000322213 MBD1Q9UIS9 605 aaPredicted RBP6.42□□□□□ -1.38
SMC1A-201ENST00000322213 INSL5Q9Y5Q6 135 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 TRBV23-1A0A0A0MS06 115 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 TCF21O43680 179 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 CTAG2O75638 210 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 CTSAP10619 480 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 PIGPP57054 158 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 ZSCAN4Q8NAM6 433 aaPredicted RBP6.42□□□□□ -1.38
SMC1A-201ENST00000322213 FBXO17Q96EF6 278 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 PLA2G12AQ9BZM1 189 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 PDE7BQ9NP56 450 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 PTGESO14684 152 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 LILRB3O75022 631 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 IL33O95760 270 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 NKX2-1P43699 371 aaPredicted RBP6.42□□□□□ -1.38
SMC1A-201ENST00000322213 GRB2P62993 217 aaKnown RBP6.42□□□□□ -1.38
SMC1A-201ENST00000322213 LEMD1Q68G75 181 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 MAMSTRQ6ZN01 415 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 SLC24A4Q8NFF2 622 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 RELTQ969Z4 430 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 SOX7Q9BT81 388 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 NKX2-4Q9H2Z4 354 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 SIRT3Q9NTG7 399 aaPredicted RBP6.42□□□□□ -1.38
SMC1A-201ENST00000322213 SLC23A2Q9UGH3 650 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 ANKRD20A5PA0PJZ0 165 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 SLC16A7O60669 478 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 CLN5O75503 358 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 CSNK1A1P48729 337 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 VASPP50552 380 aaPredicted RBP6.42□□□□□ -1.38
SMC1A-201ENST00000322213 Q5BKY6 102 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 DNAJA3Q96EY1 480 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 UBQLN4Q9NRR5 601 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 THSD7AQ9UPZ6 1657 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 LIPNQ5VXI9 398 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 DHRS7BQ6IAN0 325 aaPredicted RBP6.42□□□□□ -1.38
SMC1A-201ENST00000322213 OR10A7Q8NGE5 316 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 TNFRSF13CQ96RJ3 184 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 EPHX3Q9H6B9 360 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 PLEKHF2Q9H8W4 249 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 ABI3Q9P2A4 366 aa6.42□□□□□ -1.38
SMC1A-201ENST00000322213 SIGLEC5O15389 551 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 SLC2A10O95528 541 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 AADACL3Q5VUY0 350 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 NUDT8Q8WV74 236 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 KLK6Q92876 244 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 C1QTNF6Q9BXI9 259 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 MS4A8Q9BY19 250 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 ZC3H12DA2A288 527 aaKnown RBP6.41□□□□□ -1.38
SMC1A-201ENST00000322213 LEFTY2O00292 366 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 GJB5O95377 273 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 MT-ATP6P00846 226 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 SLC25A4P12235 298 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 MTCP1P56278 107 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 DUSP8Q13202 625 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 DPPA3Q6W0C5 159 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 TMEM184AQ6ZMB5 413 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 OR51A2Q8NGJ7 313 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 FAM3CQ92520 227 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 TM4SF18Q96CE8 201 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 UBL7Q96S82 380 aaPredicted RBP6.41□□□□□ -1.38
SMC1A-201ENST00000322213 MIXL1Q9H2W2 232 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 SLC2A9Q9NRM0 540 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF264O43296 627 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 GSTP1P09211 210 aaKnown RBP6.41□□□□□ -1.38
SMC1A-201ENST00000322213 CD99P14209 185 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 FPR2P25090 351 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 ELLP55199 621 aaPredicted RBP6.41□□□□□ -1.38
SMC1A-201ENST00000322213 FAM3BP58499 235 aaPredicted RBP6.41□□□□□ -1.38
SMC1A-201ENST00000322213 ZNF90Q03938 601 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 PLP2Q04941 152 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 OR51A4Q8NGJ6 313 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 ASB16Q96NS5 453 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 MANBALQ9NQG1 85 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 RASL12Q9NYN1 266 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 ASB1Q9Y576 335 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 WSB1Q9Y6I7 421 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 PLPP1O14494 284 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 ACAA1P09110 424 aaPredicted RBP6.41□□□□□ -1.38
SMC1A-201ENST00000322213 OR10J1P30954 320 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 SEC13P55735 322 aa6.41□□□□□ -1.38
SMC1A-201ENST00000322213 DHODHQ02127 395 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms