RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 GPR75O95800 540 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 SOD1P00441 154 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 ATXN1LP0C7T5 689 aaKnown RBP7.44□□□□□ -1.22
VPS41-202ENST00000310301 TGM1P22735 817 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 RPL29P47914 159 aaKnown RBP7.44□□□□□ -1.22
VPS41-202ENST00000310301 SEMA3BQ13214 749 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 TMEM201Q5SNT2 666 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 DLEU7Q6UYE1 221 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 SLC16A14Q7RTX9 510 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 NEURL3Q96EH8 262 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 POM121Q96HA1 1249 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 OPALINQ96PE5 141 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 TECTBQ96PL2 329 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 ZNF2Q9BSG1 426 aaPredicted RBP7.44□□□□□ -1.22
VPS41-202ENST00000310301 SOX7Q9BT81 388 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 COL25A1Q9BXS0 654 aaPredicted RBP7.44□□□□□ -1.22
VPS41-202ENST00000310301 GABARAPL3Q9BY60 117 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 PCDHB10Q9UN67 800 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 SLC17A4Q9Y2C5 497 aa7.44□□□□□ -1.22
VPS41-202ENST00000310301 YTHDF2Q9Y5A9 579 aaKnown RBP7.44□□□□□ -1.22
VPS41-202ENST00000310301 E5RGE8 158 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 CLDN17P56750 224 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 MFAP5Q13361 173 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 ETFDHQ16134 617 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 RPL7L1Q6DKI1 246 aaKnown RBP7.43□□□□□ -1.22
VPS41-202ENST00000310301 OLIG3Q7RTU3 272 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 BTLAQ7Z6A9 289 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 ADGRG3Q86Y34 549 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 THNSL2Q86YJ6 484 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 MFSD9Q8NBP5 474 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 CA5BP1Q8WTZ4 195 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 KIRREL1Q96J84 757 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 TEAD3Q99594 435 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 NXF2Q9GZY0 626 aaKnown RBP7.43□□□□□ -1.22
VPS41-202ENST00000310301 PLEKHF2Q9H8W4 249 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 GHRLQ9UBU3 117 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 NSG2Q9Y328 171 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 TRAV17A0A0B4J275 112 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 A0A1B0GWA3 101 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 AQP7P3A6NL99 342 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 H0YGG7 62 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 GPR31O00270 319 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 HRO43593 1189 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 CIDEAO60543 219 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 ALOX12BO75342 701 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 IGHA2P01877 340 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 CHRM2P08172 466 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 GLI4P10075 376 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 PVRP15151 417 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 POU3F2P20265 443 aaPredicted RBP7.43□□□□□ -1.22
VPS41-202ENST00000310301 TNFSF4P23510 183 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 CYB561P49447 251 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 IHHQ14623 411 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 FAM162BQ5T6X4 162 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 RBM45Q8IUH3 476 aaKnown RBP7.43□□□□□ -1.22
VPS41-202ENST00000310301 OR51H1Q8NH63 302 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 PPP1R1CQ8WVI7 109 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 LHX4Q969G2 390 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 THOC3Q96J01 351 aaKnown RBP7.43□□□□□ -1.22
VPS41-202ENST00000310301 ACTR3CQ9C0K3 210 aaPredicted RBP7.43□□□□□ -1.22
VPS41-202ENST00000310301 DUSP21Q9H596 190 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 PLEKHA2Q9HB19 425 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 PSME4Q14997 1843 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 TRBV11-1A0A0K0K1C0 115 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 GDF1P27539 372 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 GSK3AP49840 483 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 ZNF85Q03923 595 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 FZD2Q14332 565 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 CDONQ4KMG0 1287 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 GUSBP11Q6P575 273 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 LINC00696Q6ZRV3 163 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 OR1J1Q8NGS3 322 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 STT3BQ8TCJ2 826 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 LKAAEAR1Q8TD35 194 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 NUDT8Q8WV74 236 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 SCMH1Q96GD3 660 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 ZNF385DQ9H6B1 395 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 LYRM2Q9NU23 88 aaPredicted RBP7.43□□□□□ -1.22
VPS41-202ENST00000310301 TRAPPC1Q9Y5R8 145 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 DOCK3Q8IZD9 2030 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 GPX2P18283 190 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 PMCHP20382 165 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 ABI3BPQ7Z7G0 1075 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 ZNF429Q86V71 674 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 MMP21Q8N119 569 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 OR2L13Q8N349 312 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 ADIPOR1Q96A54 375 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 GPR87Q9BY21 358 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 PLA2G12AQ9BZM1 189 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 SLC2A9Q9NRM0 540 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 ACER3Q9NUN7 267 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 MBD1Q9UIS9 605 aaPredicted RBP7.43□□□□□ -1.22
VPS41-202ENST00000310301 PILRBQ9UKJ0 227 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 FLVCR1Q9Y5Y0 555 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 GOLGA4Q13439 2230 aaKnown RBP7.43□□□□□ -1.22
VPS41-202ENST00000310301 PLSCR5A0PG75 271 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 SERINC4A6NH21 518 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 PRKRAO75569 313 aaKnown RBP7.43□□□□□ -1.22
VPS41-202ENST00000310301 CD3DP04234 171 aa7.43□□□□□ -1.22
VPS41-202ENST00000310301 MMP7P09237 267 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms