RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 CALCBP10092 127 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 RRASP10301 218 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 CD1EP15812 388 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 RFC3P40938 356 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 PTGFRP43088 359 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 RAC3P60763 192 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 UBE2NP61088 152 aaKnown RBP5.39□□□□□ -1.55
SEC22A-201ENST00000309934 PIGFQ07326 219 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 PCOLCEQ15113 449 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 RAB11BQ15907 218 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 H3F3CQ6NXT2 135 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 PET117Q6UWS5 81 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 DBX2Q6ZNG2 339 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 COX15Q7KZN9 410 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 HMGN2P46Q86SG4 172 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 NOXO1Q8NFA2 376 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 BEST4Q8NFU0 473 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 OR2M3Q8NG83 312 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 OR52H1Q8NGJ2 320 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 CD300LFQ8TDQ1 290 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 DOK4Q8TEW6 326 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 CNTNAP3BQ96NU0 1288 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 ZNF649Q9BS31 505 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 ESRP2Q9H6T0 727 aaKnown RBP5.39□□□□□ -1.55
SEC22A-201ENST00000309934 BEX1Q9HBH7 125 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 PTTG3PQ9NZH4 202 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 IL20RAQ9UHF4 553 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 ZNF346Q9UL40 294 aaKnown RBP5.39□□□□□ -1.55
SEC22A-201ENST00000309934 LNP1A1A4G5 178 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 OR5H15A6NDH6 313 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 H3BML4 177 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 ARPC5O15511 151 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 WNT11O96014 354 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 FGF7P21781 194 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 S100A10P60903 97 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 FOXK1P85037 733 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 FOXF1Q12946 379 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 MFAP5Q13361 173 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 RAB31Q13636 194 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 ACKR1Q16570 336 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 LINC00114Q6XXX2 140 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 SPNS3Q6ZMD2 512 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 ZNF679Q8IYX0 411 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 ZNF433Q8N7K0 673 aaPredicted RBP5.39□□□□□ -1.55
SEC22A-201ENST00000309934 OR4N2Q8NGD1 307 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 OR13C3Q8NGS6 347 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 OR10R2Q8NGX6 335 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 TNFAIP8L1Q8WVP5 186 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 DYRK2Q92630 601 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 ZNF426Q9BUY5 554 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 ZNF471Q9BX82 626 aaPredicted RBP5.39□□□□□ -1.55
SEC22A-201ENST00000309934 CST11Q9H112 138 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 SLCO5A1Q9H2Y9 848 aa5.39□□□□□ -1.55
SEC22A-201ENST00000309934 GDF2Q9UK05 429 aaPredicted RBP5.39□□□□□ -1.55
SEC22A-201ENST00000309934 SLC22A23A1A5C7 686 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 SEC14L6B5MCN3 397 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 PLPP3O14495 311 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 EIF1AYO14602 144 aaKnown RBP5.38□□□□□ -1.55
SEC22A-201ENST00000309934 DXOO77932 396 aaKnown RBP5.38□□□□□ -1.55
SEC22A-201ENST00000309934 PDGFBP01127 241 aaPredicted RBP5.38□□□□□ -1.55
SEC22A-201ENST00000309934 FTH1P19P0C7X4 201 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 COX6A1P12074 109 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 LIFP15018 202 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 SPNP16150 400 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 POLR2IP36954 125 aaKnown RBP5.38□□□□□ -1.55
SEC22A-201ENST00000309934 ART1P52961 327 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 BIDP55957 195 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 ACTBP60709 375 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 LSM6P62312 80 aaKnown RBP5.38□□□□□ -1.55
SEC22A-201ENST00000309934 ACTG1P63261 375 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 HNRNPA0Q13151 305 aaKnown RBP5.38□□□□□ -1.55
SEC22A-201ENST00000309934 OPCMLQ14982 345 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 ETFDHQ16134 617 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 ACSM3Q53FZ2 586 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 FAHD2BQ6P2I3 314 aaPredicted RBP5.38□□□□□ -1.55
SEC22A-201ENST00000309934 IGF2-ASQ6U949 168 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 THNSL2Q86YJ6 484 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 DEFB124Q8NES8 71 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 NFAM1Q8NET5 270 aaPredicted RBP5.38□□□□□ -1.55
SEC22A-201ENST00000309934 FAHD2AQ96GK7 314 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 DCBLD2Q96PD2 775 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 PRSS27Q9BQR3 290 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 RHOFQ9HBH0 211 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 NGBQ9NPG2 151 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 FLRT3Q9NZU0 649 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 A0A0B4J293 547 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 IGHV3-20A0A0C4DH32 117 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 CXorf65A6NEN9 183 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 TMEM229AB2RXF0 380 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 PATE3B3GLJ2 98 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 ZNF814B7Z6K7 855 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 ZNF593O00488 134 aaPredicted RBP5.38□□□□□ -1.55
SEC22A-201ENST00000309934 GABRPO00591 440 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 KLF4O43474 513 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 ENSAO43768 121 aaKnown RBP5.38□□□□□ -1.55
SEC22A-201ENST00000309934 MRPL3P09001 348 aaKnown RBP5.38□□□□□ -1.55
SEC22A-201ENST00000309934 HIST1H1CP16403 213 aaKnown RBP5.38□□□□□ -1.55
SEC22A-201ENST00000309934 TUBG1P23258 451 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 SFTPDP35247 375 aa5.38□□□□□ -1.55
SEC22A-201ENST00000309934 OR12D2P58182 307 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms