RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ABOP16442 354 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 IGFBP3P17936 291 aaPredicted RBP12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 MMP15P51511 669 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 ARF1P84077 181 aaKnown RBP12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 RSPO4Q2I0M5 234 aaPredicted RBP12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 MTFR2Q6P444 385 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 IGFL2Q6UWQ7 119 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 CELF2-AS1Q8N7Q2 184 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 GPER1Q99527 375 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 LINC00470Q9BZP3 86 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 ATG5Q9H1Y0 275 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 KLK13Q9UKR3 277 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 TTLL8A6PVC2 850 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 CPN1P15169 458 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 SPINK2P20155 84 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 CDK2P24941 298 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 CTSSP25774 331 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 DGCR2P98153 550 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 SLC36A2Q495M3 483 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 HACD4Q5VWC8 232 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 PGAP1Q75T13 922 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 CADM3Q8N126 398 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 MMP28Q9H239 520 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 BCO1Q9HAY6 547 aa12.73□□□□□ -0.37
SHCBP1-201ENST00000303383 A0A096LPE4 126 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 A0A1W2PPZ6 126 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 PLA2G10O15496 165 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 HLA-DQB1P01920 261 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 DRAM2Q6UX65 266 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 OR52H1Q8NGJ2 320 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 FCAMRQ8WWV6 532 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 RBFOX1Q9NWB1 397 aaKnown RBP12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 A0A1B0GTI1 187 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 EFSO43281 561 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 RFX2P48378 723 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 CAPZA1P52907 286 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 HIST1H3AP68431 136 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 HIST2H3PS2Q5TEC6 136 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 HIST2H3AQ71DI3 136 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 SKA3Q8IX90 412 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 ZNF319Q9P2F9 582 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 MYEF2Q9P2K5 600 aaKnown RBP12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 SVILO95425 2214 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 CELSR3Q9NYQ7 3312 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 GFRA3O60609 400 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 DDOSTP39656 456 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 ASPHD2Q6ICH7 369 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 LILRB2Q8N423 598 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 RNF122Q9H9V4 155 aa12.72□□□□□ -0.37
SHCBP1-201ENST00000303383 FREM1Q5H8C1 2179 aa12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 CD79AP11912 226 aa12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 PSG4Q00888 419 aa12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 LILRB1Q8NHL6 650 aaPredicted RBP12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 SUN5Q8TC36 379 aa12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 SARAFQ96BY9 339 aa12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 OR2H1Q9GZK4 316 aa12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 NLKQ9UBE8 527 aa12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 OR6C6A6NF89 314 aa12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 SULT1B1O43704 296 aa12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 LANCL1O43813 399 aa12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 CCNOP22674 350 aa12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 MNDAP41218 407 aa12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 ZNF169Q14929 603 aaPredicted RBP12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 C4orf46Q504U0 113 aa12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 SFRP5Q5T4F7 317 aa12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 OR52N4Q8NGI2 321 aa12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 TRIB1Q96RU8 372 aa12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 SOX7Q9BT81 388 aa12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 KCNK15Q9H427 330 aa12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 CACNG2Q9Y698 323 aa12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 MAP1BP46821 2468 aaKnown RBP12.71□□□□□ -0.37
SHCBP1-201ENST00000303383 ACACAQ13085 2346 aa12.71□□□□□ -0.38
SHCBP1-201ENST00000303383 TGM6O95932 706 aa12.71□□□□□ -0.38
SHCBP1-201ENST00000303383 ZNF93P35789 620 aaPredicted RBP12.71□□□□□ -0.38
SHCBP1-201ENST00000303383 SRP9P49458 86 aaKnown RBP12.71□□□□□ -0.38
SHCBP1-201ENST00000303383 TAS2R20P59543 309 aa12.71□□□□□ -0.38
SHCBP1-201ENST00000303383 MRPS10P82664 201 aaKnown RBP12.71□□□□□ -0.38
SHCBP1-201ENST00000303383 ZNF627Q7L945 461 aa12.71□□□□□ -0.38
SHCBP1-201ENST00000303383 NUFIP2Q7Z417 695 aaKnown RBP12.71□□□□□ -0.38
SHCBP1-201ENST00000303383 ADGRE4PQ86SQ3 457 aa12.71□□□□□ -0.38
SHCBP1-201ENST00000303383 ZNF101Q8IZC7 436 aa12.71□□□□□ -0.38
SHCBP1-201ENST00000303383 SMIM4Q8WVI0 70 aa12.71□□□□□ -0.38
SHCBP1-201ENST00000303383 ZNF175Q9Y473 711 aa12.71□□□□□ -0.38
SHCBP1-201ENST00000303383 A0A0U1RQV5 110 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 SYNGR3O43761 229 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 AP3S2P59780 193 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 AWAT2Q6E213 333 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 GCDHQ92947 438 aaPredicted RBP12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 YIPF5Q969M3 257 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 AUNIPQ9H7T9 357 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 TRAV18A0A075B6X5 111 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 TMEM272A0A1B0GTI8 110 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 DHRS3O75911 302 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 GDNFP39905 211 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 PABPC1L2AQ5JQF8 200 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 HPS1Q92902 700 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 SLC17A5Q9NRA2 495 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 PIGLQ9Y2B2 252 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 METTL21EPA6NDL7 271 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 GABARAPH6UMI1 98 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms