RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 CLRN1P58418 232 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 SSBP1Q04837 148 aaKnown RBP11.45□□□□□ -0.58
HIF3A-204ENST00000300862 ATXN7L3Q14CW9 347 aaPredicted RBP11.45□□□□□ -0.58
HIF3A-204ENST00000300862 TOMM20Q15388 145 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 PLPPR5Q32ZL2 321 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 PRAMEF20Q5VT98 475 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 PXT1Q8NFP0 134 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 OR1M1Q8NGA1 313 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 NUBPLQ8TB37 319 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 CCDC107Q8WV48 283 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 MICU1Q9BPX6 476 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 NICN1Q9BSH3 213 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 SELENOIQ9C0D9 397 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 SAV1Q9H4B6 383 aaPredicted RBP11.45□□□□□ -0.58
HIF3A-204ENST00000300862 SCPEP1Q9HB40 452 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 BARX1Q9HBU1 254 aaPredicted RBP11.45□□□□□ -0.58
HIF3A-204ENST00000300862 HPF1Q9NWY4 346 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 ALKBH4Q9NXW9 302 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 UPB1Q9UBR1 384 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 B3GALT5Q9Y2C3 310 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 RPH3AQ9Y2J0 694 aaPredicted RBP11.45□□□□□ -0.58
HIF3A-204ENST00000300862 NOP16Q9Y3C1 178 aaKnown RBP11.45□□□□□ -0.58
HIF3A-204ENST00000300862 LHFPL6Q9Y693 200 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 ARID1AO14497 2285 aa11.45□□□□□ -0.58
HIF3A-204ENST00000300862 EML6Q6ZMW3 1958 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 IGLV3-12A0A075B6K2 115 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 MPTX1A8MV57 137 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 ABCD4O14678 606 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 RER1O15258 196 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 ZNF208O43345 1280 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 LAP3P28838 519 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 PTGDSP41222 190 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 CLDN6P56747 220 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 GMFBP60983 142 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 CCL7P80098 99 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 ZNF260Q3ZCT1 412 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 BEX5Q5H9J7 111 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 PTCRAQ6ISU1 281 aaPredicted RBP11.44□□□□□ -0.58
HIF3A-204ENST00000300862 ALKBH2Q6NS38 261 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 BEST3Q8N1M1 668 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 OR2I1PQ8NGU4 316 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 AQP3Q92482 292 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 MRGPRFQ96AM1 343 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 SLC25A21Q9BQT8 299 aaPredicted RBP11.44□□□□□ -0.58
HIF3A-204ENST00000300862 CRB3Q9BUF7 120 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 MRPL13Q9BYD1 178 aaKnown RBP11.44□□□□□ -0.58
HIF3A-204ENST00000300862 ZNF319Q9P2F9 582 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 MYOTQ9UBF9 498 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 ASH2LQ9UBL3 628 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 METTL21EPA6NDL7 271 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 DCDP81605 110 aaKnown RBP11.44□□□□□ -0.58
HIF3A-204ENST00000300862 DEFA5Q01523 94 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 FLI1Q01543 452 aaPredicted RBP11.44□□□□□ -0.58
HIF3A-204ENST00000300862 RNASE10Q5GAN6 216 aaKnown RBP11.44□□□□□ -0.58
HIF3A-204ENST00000300862 CLVS2Q5SYC1 327 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 DEGS2Q6QHC5 323 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 CPEB2Q7Z5Q1 589 aaKnown RBP11.44□□□□□ -0.58
HIF3A-204ENST00000300862 RABEPKQ7Z6M1 372 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 ANGPTL5Q86XS5 388 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 UEVLDQ8IX04 471 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 NKAIN3Q8N8D7 197 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 ALX4Q9H161 411 aaPredicted RBP11.44□□□□□ -0.58
HIF3A-204ENST00000300862 RAB22AQ9UL26 194 aa11.44□□□□□ -0.58
HIF3A-204ENST00000300862 OR14I1A6ND48 311 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 CD74P04233 296 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 CELA2AP08217 269 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 HSD11B1P28845 292 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 CD34P28906 385 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 HRH1P35367 487 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 PABPC1L2AQ5JQF8 200 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 PDSS1Q5T2R2 415 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 AWAT2Q6E213 333 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 RHOUQ7L0Q8 258 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 ABHD12BQ7Z5M8 362 aaPredicted RBP11.43□□□□□ -0.58
HIF3A-204ENST00000300862 ZNF546Q86UE3 836 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 ZNF101Q8IZC7 436 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 OR10K1Q8NGX5 313 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 OR6S1Q8NH40 331 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 FAM71F1Q96KD3 344 aaPredicted RBP11.43□□□□□ -0.58
HIF3A-204ENST00000300862 CST11Q9H112 138 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 SLC25A32Q9H2D1 315 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 SDHAF3Q9NRP4 125 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 WIF1Q9Y5W5 379 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 ADAMTS20P59510 1910 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 NCOA6Q14686 2063 aaPredicted RBP11.43□□□□□ -0.58
HIF3A-204ENST00000300862 CELSR3Q9NYQ7 3312 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 A0A1B0GTI1 187 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 A0A1W2PP11 408 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 C5orf63A6NC05 138 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 KCNAB3O43448 404 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 SUMO3P55854 103 aaPredicted RBP11.43□□□□□ -0.58
HIF3A-204ENST00000300862 QRFPP83859 136 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 ACY1Q03154 408 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 PPP1R1AQ13522 171 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 TAF13Q15543 124 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 MPPED2Q15777 294 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 TMEM176BQ3YBM2 270 aaPredicted RBP11.43□□□□□ -0.58
HIF3A-204ENST00000300862 SPEM1Q8N4L4 309 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 TMEM104Q8NE00 496 aa11.43□□□□□ -0.58
HIF3A-204ENST00000300862 CASTOR1Q8WTX7 329 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms