RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 CGGBP1Q9UFW8 167 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-201ENST00000295550 CORINQ9Y5Q5 1042 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 KIR2DS1A0A191URI9 304 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 H3BNC9 293 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 KIR2DS4P43632 304 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 SULT1A2P50226 295 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 KIR2DS1Q14954 304 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 ABHD17CQ6PCB6 329 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 C5orf46Q6UWT4 87 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 CYHR1Q6ZMK1 362 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 FA2HQ7L5A8 372 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 KIAA1958Q8N8K9 716 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 MRPL43Q8N983 215 aaKnown RBP8.99□□□□□ -0.97
COL6A3-201ENST00000295550 GOT1L1Q8NHS2 421 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-201ENST00000295550 SLC25A19Q9HC21 320 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 RAB18Q9NP72 206 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 TMEFF2Q9UIK5 374 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-201ENST00000295550 CD1CP29017 333 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 MFAP5Q13361 173 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 TEX261Q6UWH6 196 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 BCDIN3DQ7Z5W3 292 aaKnown RBP8.99□□□□□ -0.97
COL6A3-201ENST00000295550 ZNF595Q8IYB9 648 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 UBE2FQ969M7 185 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 CMBLQ96DG6 245 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 POM121Q96HA1 1249 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 TAS2R4Q9NYW5 299 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 U3KQ87 197 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 A0A0A6YYC8 382 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-201ENST00000295550 I3L1I5 382 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-201ENST00000295550 B3GALT4O96024 378 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 STAG3L2P0CL84 134 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 SLC6A11P48066 632 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 Q6ZSR6 202 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 BADQ92934 168 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 PRO1933Q9H354 126 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 GPR173Q9NS66 373 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 RPL12P30050 165 aaKnown RBP8.99□□□□□ -0.97
COL6A3-201ENST00000295550 NKG7Q16617 165 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 GPR32P1Q8NGA4 272 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 SLC39A7Q92504 469 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 CHST8Q9H2A9 424 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 PLCE1Q9P212 2302 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 WDR90Q96KV7 1748 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 SOD1P00441 154 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 RTN4RL1Q86UN2 441 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-201ENST00000295550 GDF2Q9UK05 429 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-201ENST00000295550 CA14Q9ULX7 337 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 SRPK3Q9UPE1 567 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 NTNG1Q9Y2I2 539 aa8.99□□□□□ -0.97
COL6A3-201ENST00000295550 OR2M5A3KFT3 312 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 RFC3P40938 356 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 CAMKMTQ7Z624 323 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 BANF2Q9H503 90 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 RNF167Q9H6Y7 350 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 LYRM4Q9HD34 91 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 HS3ST1O14792 307 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 ABHD16AO95870 558 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 PRR27Q6MZM9 219 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 FAM3CQ92520 227 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 PIGTQ969N2 578 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 ZIC5Q96T25 663 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 PPP1R3CQ9UQK1 317 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 SLC19A1P41440 591 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 CSNK1G2P78368 415 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 DMWDQ09019 674 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 ZNF468Q5VIY5 522 aaPredicted RBP8.98□□□□□ -0.97
COL6A3-201ENST00000295550 PLA2G12AQ9BZM1 189 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 H0YGG7 62 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 GLCEO94923 617 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 GGNBP1Q5YKI7 109 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 METRNLQ641Q3 311 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 PLXDC2Q6UX71 529 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 RELL2Q8NC24 303 aaPredicted RBP8.98□□□□□ -0.97
COL6A3-201ENST00000295550 MYEOVQ96EZ4 313 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 OR5V1Q9UGF6 321 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 LAMP3Q9UQV4 416 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 C4orf47A7E2U8 309 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 TMX2-CTNND1H3BSU7 103 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 EDDM3BP56851 147 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 RPL24P83731 157 aaKnown RBP8.98□□□□□ -0.97
COL6A3-201ENST00000295550 MLF2Q15773 248 aaPredicted RBP8.98□□□□□ -0.97
COL6A3-201ENST00000295550 RSPO2Q6UXX9 243 aaPredicted RBP8.98□□□□□ -0.97
COL6A3-201ENST00000295550 DTWD2Q8NBA8 298 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 OR13C5Q8NGS8 318 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 SHARPINQ9H0F6 387 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 CD63P08962 238 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 GLB1P16278 677 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 GALR1P47211 349 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 SLC35D3Q5M8T2 416 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 LILRA3Q8N6C8 439 aaPredicted RBP8.98□□□□□ -0.97
COL6A3-201ENST00000295550 OR10D4PQ8NGN7 298 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 FGF13Q92913 245 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 TNFRSF13CQ96RJ3 184 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 ZNF2Q9BSG1 426 aaPredicted RBP8.98□□□□□ -0.97
COL6A3-201ENST00000295550 NARFLQ9H6Q4 476 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 SUSD2Q9UGT4 822 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 PLXNB1O43157 2135 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 TRAV36DV7A0A075B6V5 113 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 SERTM1A2A2V5 107 aa8.98□□□□□ -0.97
COL6A3-201ENST00000295550 TPOP07202 933 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms