RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 GAAP10253 952 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 MTNR1AP48039 350 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 MVKQ03426 396 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 PCK2Q16822 640 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 ARHGAP21Q5T5U3 1957 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 LINC01590Q5TEZ4 76 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 CD163Q86VB7 1156 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 SPERTQ8NA61 448 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 OR5L1Q8NGL2 311 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 OR4K15Q8NH41 348 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 FNDC9Q8TBE3 224 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 ABHD3Q8WU67 409 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 C11orf40Q8WZ69 217 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 GGHQ92820 318 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 TMEM80Q96HE8 168 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 TXNDC15Q96J42 360 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 TEAD3Q99594 435 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 SLCO5A1Q9H2Y9 848 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 ASF1BQ9NVP2 202 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 MED29Q9NX70 200 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 CEP295Q9C0D2 2601 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 RBMXP38159 391 aaKnown RBP7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 RPL5P46777 297 aaKnown RBP7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 C3AR1Q16581 482 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 FAM214BQ7L5A3 538 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 SLC16A9Q7RTY1 509 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 CEACAM19Q7Z692 300 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 ZNF454Q8N9F8 522 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 TMEM185AQ8NFB2 350 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 ZNF385AQ96PM9 386 aaKnown RBP7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 OR2S2Q9NQN1 319 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 ZNF224Q9NZL3 707 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 TEX46H3BTG2 121 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 TGM6O95932 706 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 KNG1P01042 644 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 GSTT1P30711 240 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 BMXP51813 675 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 IRF3Q14653 427 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 OTPQ5XKR4 325 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 AWAT2Q6E213 333 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 FAM57BQ71RH2 274 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 LINC00346Q8IVM7 164 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 FCGR1BQ92637 280 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 LGALS12Q96DT0 336 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 MICU1Q9BPX6 476 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 WDR76Q9H967 626 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 ADGRL4Q9HBW9 690 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 MRPL15Q9P015 296 aaKnown RBP7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 COPZ2Q9P299 210 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 FAM215AQ9Y5M1 114 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 PMF1-BGLAPU3KQ54 211 aa7.43□□□□□ -1.22
PTPDC1-201ENST00000288976 A6NIN4 97 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 E9PLN8 166 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 SLC19A2O60779 497 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 RGS9O75916 674 aaPredicted RBP7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 SERPINA5P05154 406 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 CD8BP10966 210 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 TP53I3Q53FA7 332 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 HSD17B12Q53GQ0 312 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 XKRXQ6PP77 449 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 TUSC5Q8IXB3 177 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 OR6V1Q8N148 313 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 SAMD12Q8N8I0 201 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 MCHR2Q969V1 340 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 VKORC1Q9BQB6 163 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 SYT4Q9H2B2 425 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 PROCRQ9UNN8 238 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 UGT2A1Q9Y4X1 527 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 DCKP27707 260 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 LAP3P28838 519 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 LSM6P62312 80 aaKnown RBP7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 BBS1Q8NFJ9 593 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 EGLN1Q9GZT9 426 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 PLSCR4Q9NRQ2 329 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 ABRACLQ9P1F3 81 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 NXPH2O95156 264 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 PVALBP20472 110 aaPredicted RBP7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 SELENOPP49908 381 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 SSTP61278 116 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 TBCEQ15813 527 aaPredicted RBP7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 CDNFQ49AH0 187 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 CDC20BQ86Y33 519 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 WDFY1Q8IWB7 410 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 C9orf106Q8NAJ2 232 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 C1orf162Q8NEQ5 155 aaPredicted RBP7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 CCDC107Q8WV48 283 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 ASB17Q8WXJ9 295 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 UBE2FQ969M7 185 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 DMRTA2Q96SC8 542 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 KCNIP3Q9Y2W7 256 aa7.42□□□□□ -1.22
PTPDC1-201ENST00000288976 TMEM269A0A1B0GVZ9 245 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 CLEC3BP05452 202 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 OR2T7P0C7T2 308 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 PSKH1P11801 424 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 CA7P43166 264 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 PLA1AQ53H76 456 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 RHOUQ7L0Q8 258 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 SSX8Q7RTT4 187 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 DOLPP1Q86YN1 238 aa7.41□□□□□ -1.22
PTPDC1-201ENST00000288976 CCDC36Q8IYA8 594 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms