RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 CENPVL3A0A0U1RRI6 287 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 OR6C68A6NDL8 312 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 UNC119BA6NIH7 251 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 PHYHO14832 338 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 SURF4O15260 269 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 H1F0P07305 194 aaKnown RBP7.41□□□□□ -1.22
TPM3-201ENST00000271850 MELTFP08582 738 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 VIMP08670 466 aaKnown RBP7.41□□□□□ -1.22
TPM3-201ENST00000271850 COX4I1P13073 169 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 FPR3P25089 353 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 MDH1P40925 334 aaKnown RBP7.41□□□□□ -1.22
TPM3-201ENST00000271850 SRP9P49458 86 aaKnown RBP7.41□□□□□ -1.22
TPM3-201ENST00000271850 MIDNQ504T8 468 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 LCE1DQ5T752 114 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 FIP1L1Q6UN15 594 aaKnown RBP7.41□□□□□ -1.22
TPM3-201ENST00000271850 BTNL3Q6UXE8 466 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 DCDC5Q6ZRR9 648 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 FKBP9P1Q75LS8 142 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 HDXQ7Z353 690 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 ADCK1Q86TW2 530 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 ZBTB46Q86UZ6 589 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 GJC3Q8NFK1 279 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 OR8B3Q8NGG8 313 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 OR52J3Q8NH60 311 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 RP9Q8TA86 221 aaKnown RBP7.41□□□□□ -1.22
TPM3-201ENST00000271850 COG8Q96MW5 612 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 OR8B2Q96RD0 313 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 KRTAP4-7Q9BYR0 210 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 HDHD2Q9H0R4 259 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 SIRPDQ9H106 197 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 SRA1Q9HD15 236 aaKnown RBP7.41□□□□□ -1.22
TPM3-201ENST00000271850 UFSP2Q9NUQ7 469 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 ZNF446Q9NWS9 450 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 ADA2Q9NZK5 511 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 CYB5R1Q9UHQ9 305 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 TMEM5Q9Y2B1 443 aa7.41□□□□□ -1.22
TPM3-201ENST00000271850 F5H5K5 113 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 IFNL4K9M1U5 179 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 ARPC3O15145 178 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 SLC22A2O15244 555 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 TROVE2P10155 538 aaKnown RBP eCLIP7.4□□□□□ -1.22
TPM3-201ENST00000271850 RHCEP18577 417 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 CPT2P23786 658 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 OTX1P32242 354 aaPredicted RBP7.4□□□□□ -1.22
TPM3-201ENST00000271850 IFNA8P32881 189 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 MTNR1AP48039 350 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 RAG2P55895 527 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 ZNF92Q03936 586 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 TRAP1Q12931 704 aaKnown RBP7.4□□□□□ -1.22
TPM3-201ENST00000271850 OCLNQ16625 522 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 RFX4Q33E94 735 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 FGD3Q5JSP0 725 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 ZNF362Q5T0B9 420 aaPredicted RBP7.4□□□□□ -1.22
TPM3-201ENST00000271850 SFRP4Q6FHJ7 346 aaPredicted RBP7.4□□□□□ -1.22
TPM3-201ENST00000271850 SMARCD3Q6STE5 483 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 ZNF826PQ6ZT77 177 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 ARPINQ7Z6K5 226 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 WDR86Q86TI4 376 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 GCSAMQ8N6F7 178 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 CELF2-AS1Q8N7Q2 184 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 SDR9C7Q8NEX9 313 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 OR4K13Q8NH42 304 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 OR2AE1Q8NHA4 323 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 FANK1Q8TC84 345 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 SLCO4A1Q96BD0 722 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 ERMAPQ96PL5 475 aaPredicted RBP7.4□□□□□ -1.22
TPM3-201ENST00000271850 ATF6BQ99941 703 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 RASSF4Q9H2L5 321 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 OR52D1Q9H346 318 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 CCDC134Q9H6E4 229 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 PPP1R3EQ9H7J1 279 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 RPRD1BQ9NQG5 326 aaKnown RBP7.4□□□□□ -1.22
TPM3-201ENST00000271850 DCAF13Q9NV06 445 aaKnown RBP7.4□□□□□ -1.22
TPM3-201ENST00000271850 TMEM100Q9NV29 134 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 CLN8Q9UBY8 286 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 POLR1DQ9Y2S0 133 aa7.4□□□□□ -1.22
TPM3-201ENST00000271850 CD300LBA8K4G0 201 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 ZNF879B4DU55 563 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.39□□□□□ -1.23
TPM3-201ENST00000271850 NDUFA7O95182 113 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 AMY2BP19961 511 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 CA6P23280 308 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 PYCR1P32322 319 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 GSSP48637 474 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 RPS6KA3P51812 740 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 DLX1P56177 255 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 PRB3Q04118 309 aaPredicted RBP7.39□□□□□ -1.23
TPM3-201ENST00000271850 GLYATL3Q5SZD4 288 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 OLFML2AQ68BL7 652 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 ASPHD2Q6ICH7 369 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 HACD2Q6Y1H2 254 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 ZNF620Q6ZNG0 422 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 FAM90A1Q86YD7 464 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 C11orf53Q8IXP5 236 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 RNF148Q8N7C7 305 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 OR5L1Q8NGL2 311 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 OR8D4Q8NGM9 314 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 FAM162AQ96A26 154 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 SEH1LQ96EE3 360 aa7.39□□□□□ -1.23
TPM3-201ENST00000271850 PCGF1Q9BSM1 259 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms