RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 CLRN3Q8NCR9 226 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 OR10S1Q8NGN2 331 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 SLC25A32Q9H2D1 315 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 ASH2LQ9UBL3 628 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 A0A0D9SG52 128 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 A0A1W2PPC4 97 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 ALG1L2C9J202 215 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 PHYHO14832 338 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 EFSO43281 561 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 TSPAN2O60636 221 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 ZNF93P35789 620 aaPredicted RBP14.93□□□□□ -0.02
SQLE-201ENST00000265896 PLAC9Q5JTB6 97 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 NUBPLQ8TB37 319 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 PBOV1Q9GZY1 135 aa14.93□□□□□ -0.02
SQLE-201ENST00000265896 RPH3AQ9Y2J0 694 aaPredicted RBP14.93□□□□□ -0.02
SQLE-201ENST00000265896 CRTAPO75718 401 aaPredicted RBP14.92□□□□□ -0.02
SQLE-201ENST00000265896 FBLP22087 321 aaKnown RBP14.92□□□□□ -0.02
SQLE-201ENST00000265896 GLRA1P23415 457 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 AGTR1P30556 359 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 ARFRP1Q13795 201 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 LCN10Q6JVE6 187 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 HAGHLQ6PII5 290 aaPredicted RBP14.92□□□□□ -0.02
SQLE-201ENST00000265896 ZSCAN4Q8NAM6 433 aaPredicted RBP14.92□□□□□ -0.02
SQLE-201ENST00000265896 MLXQ9UH92 298 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 ZNF814B7Z6K7 855 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 E9PLN8 166 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 SERPINA5P05154 406 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 IL32P24001 234 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 SLC6A8P48029 635 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 BLKP51451 505 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 LBX1P52954 281 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 HSF1Q00613 529 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 MPPED2Q15777 294 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 NKAPLQ5M9Q1 402 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 ZNF813Q6ZN06 617 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 NUP54Q7Z3B4 507 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 C1QL2Q7Z5L3 287 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 SLC25A42Q86VD7 318 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 OR1M1Q8NGA1 313 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 OR4K17Q8NGC6 315 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 OR5AP2Q8NGF4 316 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 ARHGAP5-AS1Q96IT6 56 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 FAM117AQ9C073 453 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 ZNF304Q9HCX3 659 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 ZFHX4Q86UP3 3567 aa14.92□□□□□ -0.02
SQLE-201ENST00000265896 G3V3Y1 287 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 NPBWR1P48145 328 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 AIMP2Q13155 320 aaKnown RBP14.91□□□□□ -0.02
SQLE-201ENST00000265896 TGIF1Q15583 401 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 ELAVL1Q15717 326 aaKnown RBP14.91□□□□□ -0.02
SQLE-201ENST00000265896 ZNF585AQ6P3V2 769 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 BRICD5Q6PL45 260 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 KLHL24Q6TFL4 600 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 GRINAQ7Z429 371 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 AQP3Q92482 292 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 FBXO17Q96EF6 278 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 METTL8Q9H825 291 aaKnown RBP14.91□□□□□ -0.02
SQLE-201ENST00000265896 KLRF1Q9NZS2 232 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 LOC400499M0QZD8 3231 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 NUP210LQ5VU65 1888 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 GDF9O60383 454 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 NPIPB7O75200 414 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 HSD11B1P28845 292 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 DHPSP49366 369 aaPredicted RBP14.91□□□□□ -0.02
SQLE-201ENST00000265896 DRAM2Q6UX65 266 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 PRRT1Q99946 306 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 C2CD4DB7Z1M9 353 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 LDLRAD4O15165 306 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 EFNA2O43921 213 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 GIMD1P0DJR0 217 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 ZNF20P17024 532 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 NME2P22392 152 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 CRABP1P29762 137 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 MRPS21P82921 87 aaKnown RBP14.91□□□□□ -0.02
SQLE-201ENST00000265896 C14orf28Q4W4Y0 310 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.91□□□□□ -0.02
SQLE-201ENST00000265896 H3F3CQ6NXT2 135 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 FAM57BQ71RH2 274 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 TMEM17Q86X19 198 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 SLC38A9Q8NBW4 561 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 OR10C1Q96KK4 312 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 CMSS1Q9BQ75 279 aaKnown RBP14.91□□□□□ -0.02
SQLE-201ENST00000265896 GPR84Q9NQS5 396 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 KLHL13Q9P2N7 655 aa14.91□□□□□ -0.02
SQLE-201ENST00000265896 TLCD2A6NGC4 264 aa14.9□□□□□ -0.02
SQLE-201ENST00000265896 SRSF10O75494 262 aaKnown RBP14.9□□□□□ -0.02
SQLE-201ENST00000265896 CD8AP01732 235 aa14.9□□□□□ -0.02
SQLE-201ENST00000265896 CBR1P16152 277 aa14.9□□□□□ -0.02
SQLE-201ENST00000265896 PSMB6P28072 239 aa14.9□□□□□ -0.02
SQLE-201ENST00000265896 SGCAQ16586 387 aa14.9□□□□□ -0.02
SQLE-201ENST00000265896 PRAMEF20Q5VT98 475 aa14.9□□□□□ -0.02
SQLE-201ENST00000265896 DTX1Q86Y01 620 aa14.9□□□□□ -0.02
SQLE-201ENST00000265896 MITD1Q8WV92 249 aa14.9□□□□□ -0.02
SQLE-201ENST00000265896 ASB10Q8WXI3 467 aa14.9□□□□□ -0.02
SQLE-201ENST00000265896 DAZLQ92904 295 aaKnown RBP14.9□□□□□ -0.02
SQLE-201ENST00000265896 ALX4Q9H161 411 aaPredicted RBP14.9□□□□□ -0.02
SQLE-201ENST00000265896 MED9Q9NWA0 146 aa14.9□□□□□ -0.02
SQLE-201ENST00000265896 ZNF581Q9P0T4 197 aa14.9□□□□□ -0.02
SQLE-201ENST00000265896 ATG2AQ2TAZ0 1938 aa14.9□□□□□ -0.02
SQLE-201ENST00000265896 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms