RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 GCDHQ92947 438 aaPredicted RBP8.15□□□□□ -1.1
VPS41-201ENST00000265745 POP5Q969H6 163 aaKnown RBP8.15□□□□□ -1.1
VPS41-201ENST00000265745 BTBD10Q9BSF8 475 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 FN3KQ9H479 309 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 EGLN3Q9H6Z9 239 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 NTN4Q9HB63 628 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 ACTR3BQ9P1U1 418 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 KCNG2Q9UJ96 466 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 CDH10Q9Y6N8 788 aa8.15□□□□□ -1.1
VPS41-201ENST00000265745 TCRBV5S2A0A599 114 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 LRRC30A6NM36 301 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 LCE2BO14633 110 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 DCTN3O75935 186 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 ZNF823P16415 610 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 PYCR1P32322 319 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 MAGEA2P43356 314 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 MNAT1P51948 309 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 TPTEP56180 551 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 PAX2Q02962 417 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 MALLQ13021 153 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 MAB21L1Q13394 359 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 KLF17Q5JT82 389 aaPredicted RBP8.14□□□□□ -1.11
VPS41-201ENST00000265745 FAM201AQ5SY85 155 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 RASSF6Q6ZTQ3 369 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 PGAP1Q75T13 922 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 LNX2Q8N448 690 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 LINC00471Q8N535 108 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 PROKR2Q8NFJ6 384 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 OR52L1Q8NGH7 329 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 OR2T4Q8NH00 348 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 Q8TCH9 128 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 EDARADDQ8WWZ3 215 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 ERGIC1Q969X5 290 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 SLCO4A1Q96BD0 722 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 TMEM246Q9BRR3 403 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 PLA2G12AQ9BZM1 189 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 DDX28Q9NUL7 540 aaKnown RBP8.14□□□□□ -1.11
VPS41-201ENST00000265745 ZNF69Q9UC07 566 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 MIOXQ9UGB7 285 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 NUP50Q9UKX7 468 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 LRCH1Q9Y2L9 728 aa8.14□□□□□ -1.11
VPS41-201ENST00000265745 WNK2Q9Y3S1 2297 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 TVP23AA6NH52 213 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 CD300LBA8K4G0 201 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 M0R135 149 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 CCNB2O95067 398 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 PPIAL4GP0DN37 164 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 PSKH1P11801 424 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 ATP6V1B2P21281 511 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 OTX1P32242 354 aaPredicted RBP8.13□□□□□ -1.11
VPS41-201ENST00000265745 CD200P41217 278 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 RPS27P42677 84 aaKnown RBP8.13□□□□□ -1.11
VPS41-201ENST00000265745 RAD23AP54725 363 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 UBA52P62987 128 aaKnown RBP8.13□□□□□ -1.11
VPS41-201ENST00000265745 MXRA7P84157 204 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 ZNF92Q03936 586 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 PCK2Q16822 640 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 C21orf62-AS1Q17RA5 79 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 ZNF404Q494X3 552 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 ARMCX4Q5H9R4 360 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 RBMS3Q6XE24 437 aaKnown RBP8.13□□□□□ -1.11
VPS41-201ENST00000265745 DOK3Q7L591 496 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 KLBQ86Z14 1044 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 C1orf87Q8N0U7 546 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 BCL6BQ8N143 479 aaPredicted RBP8.13□□□□□ -1.11
VPS41-201ENST00000265745 FITM2Q8N6M3 262 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 AQP11Q8NBQ7 271 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 SLC37A3Q8NCC5 494 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 OR51L1Q8NGJ5 315 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 OR8D4Q8NGM9 314 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 SPRYD4Q8WW59 207 aaPredicted RBP8.13□□□□□ -1.11
VPS41-201ENST00000265745 SPTSSAQ969W0 71 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 DACT3Q96B18 629 aaPredicted RBP8.13□□□□□ -1.11
VPS41-201ENST00000265745 ZNF799Q96GE5 643 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 NSL1Q96IY1 281 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 MRI1Q9BV20 369 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 SSBP3Q9BWW4 388 aaPredicted RBP8.13□□□□□ -1.11
VPS41-201ENST00000265745 TSSK6Q9BXA6 273 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 NMNAT2Q9BZQ4 307 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 SLC22A4Q9H015 551 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 OR5V1Q9UGF6 321 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 PPIAL4AQ9Y536 164 aa8.13□□□□□ -1.11
VPS41-201ENST00000265745 TENM1Q9UKZ4 2725 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 KIR2DS1A0A191URI9 304 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 C5orf63A6NC05 138 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 ZNF593O00488 134 aaPredicted RBP8.12□□□□□ -1.11
VPS41-201ENST00000265745 PTBP3O95758 552 aaKnown RBP8.12□□□□□ -1.11
VPS41-201ENST00000265745 VSIG8P0DPA2 414 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 RPS2P15880 293 aaKnown RBP8.12□□□□□ -1.11
VPS41-201ENST00000265745 CA6P23280 308 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 ANOS1P23352 680 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 SLC25A1P53007 311 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 MS4A2Q01362 244 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 ID3Q02535 119 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 PPP1R8Q12972 351 aaKnown RBP8.12□□□□□ -1.11
VPS41-201ENST00000265745 CRMP1Q14194 572 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 TRIM25Q14258 630 aaKnown RBP8.12□□□□□ -1.11
VPS41-201ENST00000265745 MPPED2Q15777 294 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 MICAQ29983 383 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 SNAI3Q3KNW1 292 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms