RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 ZNF222Q9UK12 451 aa8.21□□□□□ -1.09
SSR3-201ENST00000265044 LOC100289279A0A1B0GTE1 492 aa8.21□□□□□ -1.09
SSR3-201ENST00000265044 IL2RAP01589 272 aa8.21□□□□□ -1.09
SSR3-201ENST00000265044 CDK2P24941 298 aa8.21□□□□□ -1.09
SSR3-201ENST00000265044 VEGFCP49767 419 aa8.21□□□□□ -1.09
SSR3-201ENST00000265044 RIPPLY1Q0D2K3 151 aa8.21□□□□□ -1.09
SSR3-201ENST00000265044 ZNF169Q14929 603 aaPredicted RBP8.21□□□□□ -1.09
SSR3-201ENST00000265044 PLCXD3Q63HM9 321 aa8.21□□□□□ -1.09
SSR3-201ENST00000265044 ELMOD2Q8IZ81 293 aa8.21□□□□□ -1.09
SSR3-201ENST00000265044 NKAIN3Q8N8D7 197 aa8.21□□□□□ -1.09
SSR3-201ENST00000265044 SEMA6DQ8NFY4 1073 aa8.21□□□□□ -1.09
SSR3-201ENST00000265044 ST7LQ8TDW4 575 aa8.21□□□□□ -1.09
SSR3-201ENST00000265044 RADILQ96JH8 1075 aa8.21□□□□□ -1.09
SSR3-201ENST00000265044 DMRTB1Q96MA1 342 aa8.21□□□□□ -1.09
SSR3-201ENST00000265044 ZCCHC4Q9H5U6 513 aa8.21□□□□□ -1.09
SSR3-201ENST00000265044 GPR173Q9NS66 373 aa8.21□□□□□ -1.09
SSR3-201ENST00000265044 TMEM38BQ9NVV0 291 aa8.21□□□□□ -1.09
SSR3-201ENST00000265044 DLL3Q9NYJ7 618 aa8.21□□□□□ -1.09
SSR3-201ENST00000265044 MRPS28Q9Y2Q9 187 aaKnown RBP8.21□□□□□ -1.09
SSR3-201ENST00000265044 TLN1Q9Y490 2541 aaKnown RBP8.21□□□□□ -1.1
SSR3-201ENST00000265044 A8MV72 311 aaPredicted RBP8.21□□□□□ -1.1
SSR3-201ENST00000265044 LYZL6O75951 148 aa8.21□□□□□ -1.1
SSR3-201ENST00000265044 DKK1O94907 266 aa8.21□□□□□ -1.1
SSR3-201ENST00000265044 PTGS2P35354 604 aa8.21□□□□□ -1.1
SSR3-201ENST00000265044 OR3A3P47888 321 aa8.21□□□□□ -1.1
SSR3-201ENST00000265044 OR3A2P47893 321 aa8.21□□□□□ -1.1
SSR3-201ENST00000265044 DGCR2P98153 550 aa8.21□□□□□ -1.1
SSR3-201ENST00000265044 IFITM3Q01628 133 aa8.21□□□□□ -1.1
SSR3-201ENST00000265044 PHYHD1Q5SRE7 291 aa8.21□□□□□ -1.1
SSR3-201ENST00000265044 GLIPR1L1Q6UWM5 242 aa8.21□□□□□ -1.1
SSR3-201ENST00000265044 Q6ZNX1 250 aa8.21□□□□□ -1.1
SSR3-201ENST00000265044 PGAP1Q75T13 922 aa8.21□□□□□ -1.1
SSR3-201ENST00000265044 ZFP62Q8NB50 900 aaPredicted RBP8.21□□□□□ -1.1
SSR3-201ENST00000265044 OR51T1Q8NGJ9 327 aa8.21□□□□□ -1.1
SSR3-201ENST00000265044 SETD6Q8TBK2 473 aa8.21□□□□□ -1.1
SSR3-201ENST00000265044 REEP6Q96HR9 211 aa8.21□□□□□ -1.1
SSR3-201ENST00000265044 BANF2Q9H503 90 aa8.21□□□□□ -1.1
SSR3-201ENST00000265044 CYSLTR2Q9NS75 346 aa8.21□□□□□ -1.1
SSR3-201ENST00000265044 ZNF275Q9NSD4 429 aaPredicted RBP8.21□□□□□ -1.1
SSR3-201ENST00000265044 NUFIP1Q9UHK0 495 aaKnown RBP8.21□□□□□ -1.1
SSR3-201ENST00000265044 OR6C6A6NF89 314 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 FIGNL2A6NMB9 653 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 TTLL8A6PVC2 850 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 CYTIPO60759 359 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 TTRP02766 147 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 MT-ND4P03905 459 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 HPNP05981 417 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 SDHBP21912 280 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 GDNFP39905 211 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 GTF3C1Q12789 2109 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 OXA1LQ15070 435 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 RAB35Q15286 201 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 FAM27BQ5VT28 67 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 ANKRD11Q6UB99 2663 aaPredicted RBP8.2□□□□□ -1.1
SSR3-201ENST00000265044 ZNF584Q8IVC4 421 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 C20orf196Q8IYI0 205 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 BATF2Q8N1L9 274 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 CELF2-AS1Q8N7Q2 184 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 WDFY2Q96P53 400 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 KCNK15Q9H427 330 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 NUDT15Q9NV35 164 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 CRYABP02511 175 aaKnown RBP8.2□□□□□ -1.1
SSR3-201ENST00000265044 CALCBP10092 127 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 GIFP27352 417 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 CAPZA1P52907 286 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 H3F3AP84243 136 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 FAM189A2Q15884 450 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 TEX30Q5JUR7 227 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 GDPD3Q7L5L3 318 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 GGNQ86UU5 652 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 OR10K1Q8NGX5 313 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 SELENOIQ9C0D9 397 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 NXF2Q9GZY0 626 aaKnown RBP8.2□□□□□ -1.1
SSR3-201ENST00000265044 MED28Q9H204 178 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 FANCFQ9NPI8 374 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 ZNF701Q9NV72 531 aaPredicted RBP8.2□□□□□ -1.1
SSR3-201ENST00000265044 OR5V1Q9UGF6 321 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 ETV7Q9Y603 341 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 KCNMB2Q9Y691 235 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 CACNG2Q9Y698 323 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 ETV2O00321 342 aaPredicted RBP8.2□□□□□ -1.1
SSR3-201ENST00000265044 SLC17A2O00624 439 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 EFSO43281 561 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 LMX1BO60663 402 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 GAAP10253 952 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 LHX2P50458 406 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 CD83Q01151 205 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 TMED4Q7Z7H5 227 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 OR52N4Q8NGI2 321 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 RGP1Q92546 391 aaPredicted RBP8.2□□□□□ -1.1
SSR3-201ENST00000265044 EXTL1Q92935 676 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 NEDD4LQ96PU5 975 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 TP63Q9H3D4 680 aaPredicted RBP8.2□□□□□ -1.1
SSR3-201ENST00000265044 CHMP1AQ9HD42 196 aaPredicted RBP8.2□□□□□ -1.1
SSR3-201ENST00000265044 PLEKHA6Q9Y2H5 1048 aa8.2□□□□□ -1.1
SSR3-201ENST00000265044 PKDREJQ9NTG1 2253 aa8.19□□□□□ -1.1
SSR3-201ENST00000265044 CHD8Q9HCK8 2581 aa8.19□□□□□ -1.1
SSR3-201ENST00000265044 PRRG2O14669 202 aa8.19□□□□□ -1.1
SSR3-201ENST00000265044 ECDO95905 644 aaPredicted RBP8.19□□□□□ -1.1
SSR3-201ENST00000265044 WT1P19544 449 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms