RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 SERPINA7P05543 415 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 SNRNP70P08621 437 aaKnown RBP12.59□□□□□ -0.39
CDH3-201ENST00000264012 CTXN2P0C2S0 81 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 RAD52P43351 418 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 EMP3P54852 163 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 DMRTC1Q5HYR2 192 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 ATPAF1Q5TC12 328 aaPredicted RBP12.59□□□□□ -0.39
CDH3-201ENST00000264012 CCDC190Q86UF4 302 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 TMEM217Q8N7C4 229 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 RBPMSQ93062 196 aaKnown RBP12.59□□□□□ -0.39
CDH3-201ENST00000264012 PLEKHF2Q9H8W4 249 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 SPAG17Q6Q759 2223 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 RGPD4Q7Z3J3 1758 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 WNK3Q9BYP7 1800 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 KITLGP21583 273 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 TGM1P22735 817 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 SRSF5Q13243 272 aaKnown RBP12.59□□□□□ -0.39
CDH3-201ENST00000264012 OR1C1Q15619 314 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 OR52W1Q6IF63 320 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 C10orf111Q8N326 155 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 OR8D4Q8NGM9 314 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 PTDSS2Q9BVG9 487 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 FLVCR2Q9UPI3 526 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 NINQ8N4C6 2090 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 SLC17A2O00624 439 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 GSTP1P09211 210 aaKnown RBP12.59□□□□□ -0.39
CDH3-201ENST00000264012 FAM157BP0CG42 384 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 DCTDP32321 178 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 PPT1P50897 306 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 NOVA1P51513 510 aaKnown RBP12.59□□□□□ -0.39
CDH3-201ENST00000264012 ANKRD16Q6P6B7 361 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 ZNF573Q86YE8 665 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 RNF141Q8WVD5 230 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 SMIM4Q8WVI0 70 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 FOXB1Q99853 325 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 FAM173AQ9BQD7 235 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 IER2Q9BTL4 223 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 PLA2G3Q9NZ20 509 aa12.59□□□□□ -0.39
CDH3-201ENST00000264012 FAM221AA4D161 298 aa12.58□□□□□ -0.39
CDH3-201ENST00000264012 FIGNL2A6NMB9 653 aa12.58□□□□□ -0.39
CDH3-201ENST00000264012 GREM1O60565 184 aa12.58□□□□□ -0.39
CDH3-201ENST00000264012 CRYAAP02489 173 aa12.58□□□□□ -0.39
CDH3-201ENST00000264012 FAHP16930 419 aa12.58□□□□□ -0.39
CDH3-201ENST00000264012 PTAFRP25105 342 aa12.58□□□□□ -0.39
CDH3-201ENST00000264012 INSM1Q01101 510 aaPredicted RBP12.58□□□□□ -0.39
CDH3-201ENST00000264012 FBXL4Q9UKA2 621 aa12.58□□□□□ -0.39
CDH3-201ENST00000264012 A0A0A6YYJ9 748 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 TNFSF14O43557 240 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 TMEM127O75204 238 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 MRPS34P82930 218 aaKnown RBP12.58□□□□□ -0.4
CDH3-201ENST00000264012 SLC25A26Q70HW3 274 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 PLPP5Q8NEB5 264 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 OR51A4Q8NGJ6 313 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 HAS2Q92819 552 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 ENSAO43768 121 aaKnown RBP12.58□□□□□ -0.4
CDH3-201ENST00000264012 NFYBP25208 207 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 CRYBB2P43320 205 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 HOXA1P49639 335 aaPredicted RBP12.58□□□□□ -0.4
CDH3-201ENST00000264012 GZMKP49863 264 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 PSG6Q00889 435 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 HNF4GQ14541 408 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 SSX1Q16384 188 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 KLK11Q9UBX7 282 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 LRP5LA4QPB2 252 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 BHLHE40O14503 412 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 TOX3O15405 576 aaPredicted RBP12.58□□□□□ -0.4
CDH3-201ENST00000264012 MGMTP16455 207 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 CLDN20P56880 219 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 ZNF266Q14584 549 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 ACER2Q5QJU3 275 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 OR11G2Q8NGC1 345 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 APH1BQ8WW43 257 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 MALSU1Q96EH3 234 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 CDX2Q99626 313 aaPredicted RBP12.58□□□□□ -0.4
CDH3-201ENST00000264012 SSX3Q99909 188 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 EGLN1Q9GZT9 426 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 SMOC1Q9H4F8 434 aa12.58□□□□□ -0.4
CDH3-201ENST00000264012 MKRN2OSH3BPM6 223 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 LINC01387J3KSC0 135 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 PLPP2O43688 288 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 ZFPL1O95159 310 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 GLAP06280 429 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 LSRQ86X29 649 aaPredicted RBP12.57□□□□□ -0.4
CDH3-201ENST00000264012 CCDC71Q8IV32 467 aaPredicted RBP12.57□□□□□ -0.4
CDH3-201ENST00000264012 VSTM2LQ96N03 204 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 ADGRL4Q9HBW9 690 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 EXOSC3Q9NQT5 275 aaKnown RBP12.57□□□□□ -0.4
CDH3-201ENST00000264012 SBF2Q86WG5 1849 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 A8MXE2 369 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 FFAR1O14842 300 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 CDKN2AP42771 156 aaKnown RBP12.57□□□□□ -0.4
CDH3-201ENST00000264012 UBE2MP61081 183 aaKnown RBP12.57□□□□□ -0.4
CDH3-201ENST00000264012 WDR38Q5JTN6 314 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 TMUB2Q71RG4 321 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 Q7L0L9 218 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 EXD3Q8N9H8 876 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 OR10R2Q8NGX6 335 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 TSPAN32Q96QS1 320 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 FSCN3Q9NQT6 498 aa12.57□□□□□ -0.4
CDH3-201ENST00000264012 CYSLTR2Q9NS75 346 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms