RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 NRN1LQ496H8 165 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 TMEM244Q5VVB8 128 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 ZNF813Q6ZN06 617 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 SEM1Q6ZVN7 128 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 ZNF627Q7L945 461 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 ZNF100Q8IYN0 542 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 WNT2BQ93097 391 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 GMPPAQ96IJ6 420 aaPredicted RBP15.23■□□□□ 0.03
SRSF1-201ENST00000258962 C12orf49Q9H741 205 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 PLEK2Q9NYT0 353 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 ZNF319Q9P2F9 582 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 DHDHQ9UQ10 334 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 V9GYH0 126 aa15.23■□□□□ 0.03
SRSF1-201ENST00000258962 MBD3L4A6NDZ8 208 aaPredicted RBP15.22■□□□□ 0.03
SRSF1-201ENST00000258962 MBD3L3A6NE82 208 aaPredicted RBP15.22■□□□□ 0.03
SRSF1-201ENST00000258962 MBD3L5A6NJ08 208 aaPredicted RBP15.22■□□□□ 0.03
SRSF1-201ENST00000258962 FAM90A27PA6NNH2 459 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 SYNGR3O43761 229 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 LMX1BO60663 402 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 HPGDSO60760 199 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 UPK1BO75841 260 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 TOXO94900 526 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 PATE4P0C8F1 98 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 CRYGSP22914 178 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 COL8A1P27658 744 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 CEACAM8P31997 349 aaPredicted RBP15.22■□□□□ 0.03
SRSF1-201ENST00000258962 DEFA1P59665 94 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 DEFA3P59666 94 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 GALK2Q01415 458 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 SCRN3Q0VDG4 424 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 C9orf135Q5VTT2 229 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 SP5Q6BEB4 398 aaPredicted RBP15.22■□□□□ 0.03
SRSF1-201ENST00000258962 METAP1DQ6UB28 335 aaPredicted RBP15.22■□□□□ 0.03
SRSF1-201ENST00000258962 ZNF283Q8N7M2 679 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 OR8B12Q8NGG6 310 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 MBD3L2Q8NHZ7 208 aaPredicted RBP15.22■□□□□ 0.03
SRSF1-201ENST00000258962 CHPT1Q8WUD6 406 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 SLC7A6Q92536 515 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 SLITRK2Q9H156 845 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 TCF7L1Q9HCS4 588 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 ZNF224Q9NZL3 707 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 A0A1B0GTI1 187 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 C5orf63A6NC05 138 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 SGCEO43556 437 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 DBHP09172 617 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 MMP7P09237 267 aaPredicted RBP15.22■□□□□ 0.03
SRSF1-201ENST00000258962 APEX1P27695 318 aaKnown RBP15.22■□□□□ 0.03
SRSF1-201ENST00000258962 OR3A2P47893 321 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 FAPQ12884 760 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 ZNF774Q6NX45 483 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 SLC16A14Q7RTX9 510 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 NAA40Q86UY6 237 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 SNX29P2Q8IUI4 249 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 OR13C3Q8NGS6 347 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 COX4I2Q96KJ9 171 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 ZFP3Q96NJ6 502 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 HDHD2Q9H0R4 259 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 WNT5BQ9H1J7 359 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 GLRX2Q9NS18 164 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 UPB1Q9UBR1 384 aa15.22■□□□□ 0.03
SRSF1-201ENST00000258962 OR6C6A6NF89 314 aa15.21■□□□□ 0.03
SRSF1-201ENST00000258962 PAHP00439 452 aa15.21■□□□□ 0.03
SRSF1-201ENST00000258962 PSG4Q00888 419 aa15.21■□□□□ 0.03
SRSF1-201ENST00000258962 IFITM3Q01628 133 aa15.21■□□□□ 0.03
SRSF1-201ENST00000258962 TRIM16LQ309B1 348 aa15.21■□□□□ 0.03
SRSF1-201ENST00000258962 KRTAP27-1Q3LI81 207 aa15.21■□□□□ 0.03
SRSF1-201ENST00000258962 HIST2H2BCQ6DN03 193 aa15.21■□□□□ 0.03
SRSF1-201ENST00000258962 Q6ZNX1 250 aa15.21■□□□□ 0.03
SRSF1-201ENST00000258962 FAM57BQ71RH2 274 aa15.21■□□□□ 0.03
SRSF1-201ENST00000258962 GCNT2Q8N0V5 402 aa15.21■□□□□ 0.03
SRSF1-201ENST00000258962 UBE2J2Q8N2K1 259 aa15.21■□□□□ 0.03
SRSF1-201ENST00000258962 ZNF433Q8N7K0 673 aaPredicted RBP15.21■□□□□ 0.03
SRSF1-201ENST00000258962 C9orf106Q8NAJ2 232 aa15.21■□□□□ 0.03
SRSF1-201ENST00000258962 AKR7LQ8NHP1 331 aa15.21■□□□□ 0.03
SRSF1-201ENST00000258962 OR51E1Q8TCB6 317 aa15.21■□□□□ 0.03
SRSF1-201ENST00000258962 DIRAS2Q96HU8 199 aa15.21■□□□□ 0.03
SRSF1-201ENST00000258962 OR2H1Q9GZK4 316 aa15.21■□□□□ 0.03
SRSF1-201ENST00000258962 SLC17A5Q9NRA2 495 aa15.21■□□□□ 0.03
SRSF1-201ENST00000258962 MALT1Q9UDY8 824 aa15.21■□□□□ 0.03
SRSF1-201ENST00000258962 ZNF629Q9UEG4 869 aaPredicted RBP15.21■□□□□ 0.03
SRSF1-201ENST00000258962 A0A0B4J203 849 aa15.2■□□□□ 0.02
SRSF1-201ENST00000258962 F5H5K5 113 aa15.2■□□□□ 0.02
SRSF1-201ENST00000258962 FARS2O95363 451 aaKnown RBP15.2■□□□□ 0.02
SRSF1-201ENST00000258962 ANXA2P07355 339 aaKnown RBP15.2■□□□□ 0.02
SRSF1-201ENST00000258962 TMIGD3P0DMS9 266 aaPredicted RBP15.2■□□□□ 0.02
SRSF1-201ENST00000258962 IGFBP3P17936 291 aaPredicted RBP15.2■□□□□ 0.02
SRSF1-201ENST00000258962 FSTP19883 344 aa15.2■□□□□ 0.02
SRSF1-201ENST00000258962 BMP5P22003 454 aa15.2■□□□□ 0.02
SRSF1-201ENST00000258962 PCBD1P61457 104 aa15.2■□□□□ 0.02
SRSF1-201ENST00000258962 ZNF79Q15937 498 aa15.2■□□□□ 0.02
SRSF1-201ENST00000258962 OR2A2Q6IF42 318 aa15.2■□□□□ 0.02
SRSF1-201ENST00000258962 DNAAF1Q8NEP3 725 aa15.2■□□□□ 0.02
SRSF1-201ENST00000258962 OR1F12Q8NHA8 337 aa15.2■□□□□ 0.02
SRSF1-201ENST00000258962 SDHCQ99643 169 aaPredicted RBP15.2■□□□□ 0.02
SRSF1-201ENST00000258962 WACQ9BTA9 647 aa15.2■□□□□ 0.02
SRSF1-201ENST00000258962 MRI1Q9BV20 369 aa15.2■□□□□ 0.02
SRSF1-201ENST00000258962 TIMM10BQ9Y5J6 103 aa15.2■□□□□ 0.02
SRSF1-201ENST00000258962 N6AMT1Q9Y5N5 214 aa15.2■□□□□ 0.02
SRSF1-201ENST00000258962 V9GY05 133 aa15.2■□□□□ 0.02
SRSF1-201ENST00000258962 A0A096LPE4 126 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms