RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 SSBP1Q04837 148 aaKnown RBP16.43■□□□□ 0.22
LRP3-201ENST00000253193 MPPED2Q15777 294 aa16.43■□□□□ 0.22
LRP3-201ENST00000253193 C5orf46Q6UWT4 87 aa16.43■□□□□ 0.22
LRP3-201ENST00000253193 CSNK2A3Q8NEV1 391 aa16.43■□□□□ 0.22
LRP3-201ENST00000253193 OR5M8Q8NGP6 311 aa16.43■□□□□ 0.22
LRP3-201ENST00000253193 LRRC46Q96FV0 321 aa16.43■□□□□ 0.22
LRP3-201ENST00000253193 WDR77Q9BQA1 342 aaPredicted RBP16.43■□□□□ 0.22
LRP3-201ENST00000253193 SULT2B1O00204 365 aa16.43■□□□□ 0.22
LRP3-201ENST00000253193 SERPINF1P36955 418 aa16.43■□□□□ 0.22
LRP3-201ENST00000253193 GABREP78334 506 aa16.43■□□□□ 0.22
LRP3-201ENST00000253193 OR5L2Q8NGL0 311 aa16.43■□□□□ 0.22
LRP3-201ENST00000253193 LDAHQ9H6V9 325 aa16.43■□□□□ 0.22
LRP3-201ENST00000253193 BCAT2O15382 392 aaPredicted RBP16.43■□□□□ 0.22
LRP3-201ENST00000253193 HOXB5P09067 269 aa16.43■□□□□ 0.22
LRP3-201ENST00000253193 LAP3P28838 519 aa16.43■□□□□ 0.22
LRP3-201ENST00000253193 MISPQ8IVT2 679 aa16.43■□□□□ 0.22
LRP3-201ENST00000253193 ADAD2Q8NCV1 583 aaKnown RBP16.43■□□□□ 0.22
LRP3-201ENST00000253193 OR6K3Q8NGY3 331 aa16.43■□□□□ 0.22
LRP3-201ENST00000253193 MFSD8Q8NHS3 518 aa16.43■□□□□ 0.22
LRP3-201ENST00000253193 MRPS17Q9Y2R5 130 aaKnown RBP16.43■□□□□ 0.22
LRP3-201ENST00000253193 LAMA1P25391 3075 aa16.43■□□□□ 0.22
LRP3-201ENST00000253193 OR6C65A6NJZ3 312 aa16.42■□□□□ 0.22
LRP3-201ENST00000253193 SERPINA2P20848 420 aa16.42■□□□□ 0.22
LRP3-201ENST00000253193 DHPSP49366 369 aaPredicted RBP16.42■□□□□ 0.22
LRP3-201ENST00000253193 ASPHD2Q6ICH7 369 aa16.42■□□□□ 0.22
LRP3-201ENST00000253193 FDX2Q6P4F2 183 aa16.42■□□□□ 0.22
LRP3-201ENST00000253193 PEG10Q86TG7 708 aaKnown RBP16.42■□□□□ 0.22
LRP3-201ENST00000253193 OR10G3Q8NGC4 313 aa16.42■□□□□ 0.22
LRP3-201ENST00000253193 ST8SIA1Q92185 356 aa16.42■□□□□ 0.22
LRP3-201ENST00000253193 URM1Q9BTM9 101 aaKnown RBP16.42■□□□□ 0.22
LRP3-201ENST00000253193 RBM24Q9BX46 236 aaKnown RBP16.42■□□□□ 0.22
LRP3-201ENST00000253193 CSAG2Q9Y5P2 127 aa16.42■□□□□ 0.22
LRP3-201ENST00000253193 VSIG8P0DPA2 414 aa16.42■□□□□ 0.22
LRP3-201ENST00000253193 ACOT7LQ6ZUV0 252 aa16.42■□□□□ 0.22
LRP3-201ENST00000253193 CPNE2Q96FN4 548 aaPredicted RBP16.42■□□□□ 0.22
LRP3-201ENST00000253193 ZNF285Q96NJ3 590 aa16.42■□□□□ 0.22
LRP3-201ENST00000253193 G6PC2Q9NQR9 355 aa16.42■□□□□ 0.22
LRP3-201ENST00000253193 RARRES3Q9UL19 164 aa16.42■□□□□ 0.22
LRP3-201ENST00000253193 ANKUB1A6NFN9 424 aa16.42■□□□□ 0.22
LRP3-201ENST00000253193 SRPK3Q9UPE1 567 aa16.42■□□□□ 0.22
LRP3-201ENST00000253193 RHBDD3Q9Y3P4 386 aa16.42■□□□□ 0.22
LRP3-201ENST00000253193 C9orf170A2RU37 121 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 NUDT21O43809 227 aaKnown RBP16.41■□□□□ 0.22
LRP3-201ENST00000253193 TTRP02766 147 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 EFNA3P52797 238 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 CLDN6P56747 220 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 ZNF121P58317 390 aaPredicted RBP16.41■□□□□ 0.22
LRP3-201ENST00000253193 FOXK1P85037 733 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 SNTB1Q13884 538 aaKnown RBP16.41■□□□□ 0.22
LRP3-201ENST00000253193 STK11Q15831 433 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 OR13C8Q8NGS7 320 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 OR10R2Q8NGX6 335 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 ADAT1Q9BUB4 502 aaKnown RBP16.41■□□□□ 0.22
LRP3-201ENST00000253193 A0A1B0GTQ1 180 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 A0A1W2PP11 408 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 TMEM200CA6NKL6 621 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 DNASE2O00115 360 aaPredicted RBP16.41■□□□□ 0.22
LRP3-201ENST00000253193 AQP8O94778 261 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 TPPPO94811 219 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 WDPCPO95876 746 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 QDPRP09417 244 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 GLB1P16278 677 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 CLDN17P56750 224 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 TMEM88Q6PEY1 159 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 UTP23Q9BRU9 249 aaKnown RBP16.41■□□□□ 0.22
LRP3-201ENST00000253193 LHX6Q9UPM6 363 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 B3GALT5Q9Y2C3 310 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 OR6C76A6NM76 312 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 RAB27BO00194 218 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 SCGB1D2O95969 90 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 RAET1LQ5VY80 246 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 GAREM1Q9H706 876 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 ZNF160Q9HCG1 818 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 HPF1Q9NWY4 346 aa16.41■□□□□ 0.22
LRP3-201ENST00000253193 TRIOBPQ9H2D6 2365 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 OR2F2O95006 317 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 NXPH1P58417 271 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 OR2F1Q13607 317 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 CHRFAM7AQ494W8 412 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 ZNF585AQ6P3V2 769 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 ALX4Q9H161 411 aaPredicted RBP16.4■□□□□ 0.22
LRP3-201ENST00000253193 SLC25A32Q9H2D1 315 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 ZNF705EA8MWA4 302 aaPredicted RBP16.4■□□□□ 0.22
LRP3-201ENST00000253193 AGPAT2O15120 278 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 ZNF354AO60765 605 aaPredicted RBP16.4■□□□□ 0.22
LRP3-201ENST00000253193 HPP00738 406 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 OR3A4PP47883 348 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 OR2I1PQ8NGU4 316 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 SOX7Q9BT81 388 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 FBXO9Q9UK97 447 aaPredicted RBP16.4■□□□□ 0.22
LRP3-201ENST00000253193 SLC5A6Q9Y289 635 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 KCNK7Q9Y2U2 307 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 TRAV14DV4A0A0A6YYC5 116 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 SOCS1O15524 211 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 ZFAND5O76080 213 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 OR2W3Q7Z3T1 314 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 D2HGDHQ8N465 521 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 BPIFCQ8NFQ6 507 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 ST7LQ8TDW4 575 aa16.4■□□□□ 0.22
LRP3-201ENST00000253193 RNF133Q8WVZ7 376 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms