RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 CLDN34H7C241 214 aa17.59■□□□□ 0.41
NEDD8-201ENST00000250495 M0R135 149 aa17.59■□□□□ 0.41
NEDD8-201ENST00000250495 ARPC2O15144 300 aa17.59■□□□□ 0.41
NEDD8-201ENST00000250495 RNASE1P07998 156 aaKnown RBP17.59■□□□□ 0.41
NEDD8-201ENST00000250495 IGHV4-38-2P0DP08 117 aa17.59■□□□□ 0.41
NEDD8-201ENST00000250495 PRSS12P56730 875 aa17.59■□□□□ 0.41
NEDD8-201ENST00000250495 FAM201AQ5SY85 155 aa17.59■□□□□ 0.41
NEDD8-201ENST00000250495 PGBD2Q6P3X8 592 aa17.59■□□□□ 0.41
NEDD8-201ENST00000250495 DCDC5Q6ZRR9 648 aa17.59■□□□□ 0.41
NEDD8-201ENST00000250495 ZDHHC21Q8IVQ6 265 aa17.59■□□□□ 0.41
NEDD8-201ENST00000250495 LINC00471Q8N535 108 aa17.59■□□□□ 0.41
NEDD8-201ENST00000250495 DACT3Q96B18 629 aaPredicted RBP17.59■□□□□ 0.41
NEDD8-201ENST00000250495 ZNF799Q96GE5 643 aa17.59■□□□□ 0.41
NEDD8-201ENST00000250495 C1orf147Q96MC9 270 aaPredicted RBP17.59■□□□□ 0.41
NEDD8-201ENST00000250495 RAB3IPQ96QF0 476 aaPredicted RBP17.59■□□□□ 0.41
NEDD8-201ENST00000250495 T-ENOLP0DO92 83 aa17.58■□□□□ 0.4
NEDD8-201ENST00000250495 CALB2P22676 271 aa17.58■□□□□ 0.4
NEDD8-201ENST00000250495 HMGA2P52926 109 aa17.58■□□□□ 0.4
NEDD8-201ENST00000250495 OR8G1Q15617 311 aa17.58■□□□□ 0.4
NEDD8-201ENST00000250495 SPATS1Q496A3 300 aa17.58■□□□□ 0.4
NEDD8-201ENST00000250495 CLEC12AQ5QGZ9 265 aa17.58■□□□□ 0.4
NEDD8-201ENST00000250495 PROKR2Q8NFJ6 384 aa17.58■□□□□ 0.4
NEDD8-201ENST00000250495 OR2T4Q8NH00 348 aa17.58■□□□□ 0.4
NEDD8-201ENST00000250495 MAP6Q96JE9 813 aa17.58■□□□□ 0.4
NEDD8-201ENST00000250495 NUDT16L1Q9BRJ7 211 aaKnown RBP17.58■□□□□ 0.4
NEDD8-201ENST00000250495 NDE1Q9NXR1 346 aa17.58■□□□□ 0.4
NEDD8-201ENST00000250495 CDH10Q9Y6N8 788 aa17.58■□□□□ 0.4
NEDD8-201ENST00000250495 IGHV3OR16-10A0A075B7F0 116 aa17.57■□□□□ 0.4
NEDD8-201ENST00000250495 CD300LBA8K4G0 201 aa17.57■□□□□ 0.4
NEDD8-201ENST00000250495 PHYHO14832 338 aa17.57■□□□□ 0.4
NEDD8-201ENST00000250495 GMDSO60547 372 aa17.57■□□□□ 0.4
NEDD8-201ENST00000250495 FAM20BO75063 409 aa17.57■□□□□ 0.4
NEDD8-201ENST00000250495 PLATP00750 562 aa17.57■□□□□ 0.4
NEDD8-201ENST00000250495 CA6P23280 308 aa17.57■□□□□ 0.4
NEDD8-201ENST00000250495 KCNJ8Q15842 424 aa17.57■□□□□ 0.4
NEDD8-201ENST00000250495 WDR25Q64LD2 544 aaPredicted RBP17.57■□□□□ 0.4
NEDD8-201ENST00000250495 C16orf89Q6UX73 402 aa17.57■□□□□ 0.4
NEDD8-201ENST00000250495 PLPP7Q8NBV4 271 aa17.57■□□□□ 0.4
NEDD8-201ENST00000250495 DDOQ99489 341 aa17.57■□□□□ 0.4
NEDD8-201ENST00000250495 EGLN3Q9H6Z9 239 aa17.57■□□□□ 0.4
NEDD8-201ENST00000250495 FN3KRPQ9HA64 309 aa17.57■□□□□ 0.4
NEDD8-201ENST00000250495 UFSP2Q9NUQ7 469 aa17.57■□□□□ 0.4
NEDD8-201ENST00000250495 IL20Q9NYY1 176 aa17.57■□□□□ 0.4
NEDD8-201ENST00000250495 RNF7Q9UBF6 113 aa17.57■□□□□ 0.4
NEDD8-201ENST00000250495 TAGLN3Q9UI15 199 aa17.57■□□□□ 0.4
NEDD8-201ENST00000250495 GGT3PA6NGU5 568 aa17.56■□□□□ 0.4
NEDD8-201ENST00000250495 TNFRSF11BO00300 401 aa17.56■□□□□ 0.4
NEDD8-201ENST00000250495 BHLHE40O14503 412 aa17.56■□□□□ 0.4
NEDD8-201ENST00000250495 PYCR1P32322 319 aa17.56■□□□□ 0.4
NEDD8-201ENST00000250495 PSMB10P40306 273 aa17.56■□□□□ 0.4
NEDD8-201ENST00000250495 NPY4RP50391 375 aa17.56■□□□□ 0.4
NEDD8-201ENST00000250495 SLC9A3R2Q15599 337 aa17.56■□□□□ 0.4
NEDD8-201ENST00000250495 PRAMEF6Q5VXH4 476 aa17.56■□□□□ 0.4
NEDD8-201ENST00000250495 DRAM2Q6UX65 266 aa17.56■□□□□ 0.4
NEDD8-201ENST00000250495 LYPD2Q6UXB3 125 aa17.56■□□□□ 0.4
NEDD8-201ENST00000250495 CYB561A3Q8NBI2 242 aa17.56■□□□□ 0.4
NEDD8-201ENST00000250495 OR4C15Q8NGM1 316 aa17.56■□□□□ 0.4
NEDD8-201ENST00000250495 SLC7A6OSQ96CW6 309 aaPredicted RBP17.56■□□□□ 0.4
NEDD8-201ENST00000250495 NSL1Q96IY1 281 aa17.56■□□□□ 0.4
NEDD8-201ENST00000250495 TRIM15Q9C019 465 aa17.56■□□□□ 0.4
NEDD8-201ENST00000250495 TRAV40A0A0B4J280 105 aa17.55■□□□□ 0.4
NEDD8-201ENST00000250495 TVP23AA6NH52 213 aa17.55■□□□□ 0.4
NEDD8-201ENST00000250495 POM121CA8CG34 1229 aa17.55■□□□□ 0.4
NEDD8-201ENST00000250495 TMPRSS2O15393 492 aa17.55■□□□□ 0.4
NEDD8-201ENST00000250495 OTX1P32242 354 aaPredicted RBP17.55■□□□□ 0.4
NEDD8-201ENST00000250495 BPIFB3P59826 476 aa17.55■□□□□ 0.4
NEDD8-201ENST00000250495 ELF3P78545 371 aaPredicted RBP17.55■□□□□ 0.4
NEDD8-201ENST00000250495 IL13RA1P78552 427 aa17.55■□□□□ 0.4
NEDD8-201ENST00000250495 ZNF92Q03936 586 aa17.55■□□□□ 0.4
NEDD8-201ENST00000250495 RIPK1Q13546 671 aa17.55■□□□□ 0.4
NEDD8-201ENST00000250495 MPPED2Q15777 294 aa17.55■□□□□ 0.4
NEDD8-201ENST00000250495 CD276Q5ZPR3 534 aa17.55■□□□□ 0.4
NEDD8-201ENST00000250495 ZNF841Q6ZN19 808 aa17.55■□□□□ 0.4
NEDD8-201ENST00000250495 DEFB107AQ8IZN7 70 aa17.55■□□□□ 0.4
NEDD8-201ENST00000250495 SPERTQ8NA61 448 aa17.55■□□□□ 0.4
NEDD8-201ENST00000250495 OR10S1Q8NGN2 331 aa17.55■□□□□ 0.4
NEDD8-201ENST00000250495 TRIM36Q9NQ86 728 aa17.55■□□□□ 0.4
NEDD8-201ENST00000250495 ERVK-18Q9QC07 812 aa17.55■□□□□ 0.4
NEDD8-201ENST00000250495 LYVE1Q9Y5Y7 322 aa17.55■□□□□ 0.4
NEDD8-201ENST00000250495 ENSAO43768 121 aaKnown RBP17.54■□□□□ 0.4
NEDD8-201ENST00000250495 PTBP3O95758 552 aaKnown RBP17.54■□□□□ 0.4
NEDD8-201ENST00000250495 FMO3P31513 532 aa17.54■□□□□ 0.4
NEDD8-201ENST00000250495 RPS27P42677 84 aaKnown RBP17.54■□□□□ 0.4
NEDD8-201ENST00000250495 MXRA7P84157 204 aa17.54■□□□□ 0.4
NEDD8-201ENST00000250495 MZT1Q08AG7 82 aa17.54■□□□□ 0.4
NEDD8-201ENST00000250495 TAF13Q15543 124 aa17.54■□□□□ 0.4
NEDD8-201ENST00000250495 SNAI3Q3KNW1 292 aa17.54■□□□□ 0.4
NEDD8-201ENST00000250495 PRR31Q5SQ13 230 aa17.54■□□□□ 0.4
NEDD8-201ENST00000250495 ZNF362Q5T0B9 420 aaPredicted RBP17.54■□□□□ 0.4
NEDD8-201ENST00000250495 C16orf87Q6PH81 154 aa17.54■□□□□ 0.4
NEDD8-201ENST00000250495 RASSF6Q6ZTQ3 369 aa17.54■□□□□ 0.4
NEDD8-201ENST00000250495 DCXRQ7Z4W1 244 aa17.54■□□□□ 0.4
NEDD8-201ENST00000250495 C19orf18Q8NEA5 215 aa17.54■□□□□ 0.4
NEDD8-201ENST00000250495 OR9Q2Q8NGE9 314 aa17.54■□□□□ 0.4
NEDD8-201ENST00000250495 BTBD10Q9BSF8 475 aa17.54■□□□□ 0.4
NEDD8-201ENST00000250495 COPS4Q9BT78 406 aa17.54■□□□□ 0.4
NEDD8-201ENST00000250495 ADAT1Q9BUB4 502 aaKnown RBP17.54■□□□□ 0.4
NEDD8-201ENST00000250495 ZNF696Q9H7X3 374 aa17.54■□□□□ 0.4
NEDD8-201ENST00000250495 UNKLQ9H9P5 680 aaKnown RBP17.54■□□□□ 0.4
NEDD8-201ENST00000250495 ARL8BQ9NVJ2 186 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms