RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ALOX5APP20292 161 aa20.63■□□□□ 0.89
SDF2L1-201ENST00000248958 ALDH3A2P51648 485 aa20.63■□□□□ 0.89
SDF2L1-201ENST00000248958 GLYATL3Q5SZD4 288 aa20.63■□□□□ 0.89
SDF2L1-201ENST00000248958 KCTD18Q6PI47 426 aaPredicted RBP20.63■□□□□ 0.89
SDF2L1-201ENST00000248958 DEGS2Q6QHC5 323 aa20.63■□□□□ 0.89
SDF2L1-201ENST00000248958 PEG10Q86TG7 708 aaKnown RBP20.63■□□□□ 0.89
SDF2L1-201ENST00000248958 SPRYD4Q8WW59 207 aaPredicted RBP20.63■□□□□ 0.89
SDF2L1-201ENST00000248958 AMELYQ99218 206 aa20.63■□□□□ 0.89
SDF2L1-201ENST00000248958 MNTQ99583 582 aa20.63■□□□□ 0.89
SDF2L1-201ENST00000248958 C9orf16Q9BUW7 83 aa20.63■□□□□ 0.89
SDF2L1-201ENST00000248958 HAO2Q9NYQ3 351 aa20.63■□□□□ 0.89
SDF2L1-201ENST00000248958 HIVEP2P31629 2446 aa20.63■□□□□ 0.89
SDF2L1-201ENST00000248958 DYSFO75923 2080 aa20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 GGT3PA6NGU5 568 aa20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 IFNL4K9M1U5 179 aa20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 EI24O14681 340 aa20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 SLC2A1P11166 492 aa20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 HOXB4P17483 251 aaPredicted RBP20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 CFL1P23528 166 aaKnown RBP20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 SRP9P49458 86 aaKnown RBP20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 ZNF92Q03936 586 aa20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 PQLC1Q8N2U9 271 aa20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 BHLHE23Q8NDY6 225 aa20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 OR8J1Q8NGP2 316 aa20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 ITLN1Q8WWA0 313 aa20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 ASB17Q8WXJ9 295 aa20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 STMN2Q93045 179 aa20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 SPSB4Q96A44 273 aa20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 C1orf159Q96HA4 380 aa20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 OR2V2Q96R30 315 aa20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 IL4I1Q96RQ9 567 aa20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 CNN2Q99439 309 aaKnown RBP20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 TMEM160Q9NX00 188 aa20.62■□□□□ 0.89
SDF2L1-201ENST00000248958 CD300LBA8K4G0 201 aa20.61■□□□□ 0.89
SDF2L1-201ENST00000248958 PHYHO14832 338 aa20.61■□□□□ 0.89
SDF2L1-201ENST00000248958 TBX1O43435 398 aa20.61■□□□□ 0.89
SDF2L1-201ENST00000248958 ZNF16P17020 682 aaPredicted RBP20.61■□□□□ 0.89
SDF2L1-201ENST00000248958 POLR2IP36954 125 aaKnown RBP20.61■□□□□ 0.89
SDF2L1-201ENST00000248958 DDOSTP39656 456 aa20.61■□□□□ 0.89
SDF2L1-201ENST00000248958 ZNF121P58317 390 aaPredicted RBP20.61■□□□□ 0.89
SDF2L1-201ENST00000248958 CDC42P60953 191 aa20.61■□□□□ 0.89
SDF2L1-201ENST00000248958 FAM166AQ6J272 317 aa20.61■□□□□ 0.89
SDF2L1-201ENST00000248958 KRT77Q7Z794 578 aa20.61■□□□□ 0.89
SDF2L1-201ENST00000248958 CLDND2Q8NHS1 167 aa20.61■□□□□ 0.89
SDF2L1-201ENST00000248958 TRUB1Q8WWH5 349 aaKnown RBP20.61■□□□□ 0.89
SDF2L1-201ENST00000248958 MSI2Q96DH6 328 aaKnown RBP20.61■□□□□ 0.89
SDF2L1-201ENST00000248958 OR10A2Q9H208 303 aa20.61■□□□□ 0.89
SDF2L1-201ENST00000248958 RGCCQ9H4X1 137 aa20.61■□□□□ 0.89
SDF2L1-201ENST00000248958 WIPI2Q9Y4P8 454 aa20.61■□□□□ 0.89
SDF2L1-201ENST00000248958 N6AMT1Q9Y5N5 214 aa20.61■□□□□ 0.89
SDF2L1-201ENST00000248958 CACNG2Q9Y698 323 aa20.61■□□□□ 0.89
SDF2L1-201ENST00000248958 LOC100289279A0A1B0GTE1 492 aa20.6■□□□□ 0.89
SDF2L1-201ENST00000248958 TMED1Q13445 227 aa20.6■□□□□ 0.89
SDF2L1-201ENST00000248958 TIGD6Q17RP2 521 aa20.6■□□□□ 0.89
SDF2L1-201ENST00000248958 PRSS45Q7RTY3 260 aa20.6■□□□□ 0.89
SDF2L1-201ENST00000248958 CELF2-AS1Q8N7Q2 184 aa20.6■□□□□ 0.89
SDF2L1-201ENST00000248958 LINC01356Q8N9X3 169 aa20.6■□□□□ 0.89
SDF2L1-201ENST00000248958 OR2AE1Q8NHA4 323 aa20.6■□□□□ 0.89
SDF2L1-201ENST00000248958 MROQ9BYG7 248 aa20.6■□□□□ 0.89
SDF2L1-201ENST00000248958 TMEM106BQ9NUM4 274 aa20.6■□□□□ 0.89
SDF2L1-201ENST00000248958 DNAJC27Q9NZQ0 273 aa20.6■□□□□ 0.89
SDF2L1-201ENST00000248958 MRPL15Q9P015 296 aaKnown RBP20.6■□□□□ 0.89
SDF2L1-201ENST00000248958 WARS2Q9UGM6 360 aaKnown RBP20.6■□□□□ 0.89
SDF2L1-201ENST00000248958 KCNS2Q9ULS6 477 aa20.6■□□□□ 0.89
SDF2L1-201ENST00000248958 PPP1R3CQ9UQK1 317 aa20.6■□□□□ 0.89
SDF2L1-201ENST00000248958 M0R129 80 aa20.59■□□□□ 0.89
SDF2L1-201ENST00000248958 MLNRO43193 412 aa20.59■□□□□ 0.89
SDF2L1-201ENST00000248958 ZNF254O75437 659 aa20.59■□□□□ 0.89
SDF2L1-201ENST00000248958 CRLF1O75462 422 aa20.59■□□□□ 0.89
SDF2L1-201ENST00000248958 MRPL3P09001 348 aaKnown RBP20.59■□□□□ 0.89
SDF2L1-201ENST00000248958 DCTDP32321 178 aa20.59■□□□□ 0.89
SDF2L1-201ENST00000248958 MVKQ03426 396 aa20.59■□□□□ 0.89
SDF2L1-201ENST00000248958 SPRNQ5BIV9 151 aa20.59■□□□□ 0.89
SDF2L1-201ENST00000248958 LRRN1Q6UXK5 716 aa20.59■□□□□ 0.89
SDF2L1-201ENST00000248958 FAM57BQ71RH2 274 aa20.59■□□□□ 0.89
SDF2L1-201ENST00000248958 CBR4Q8N4T8 237 aa20.59■□□□□ 0.89
SDF2L1-201ENST00000248958 OR10AD1Q8NGE0 317 aa20.59■□□□□ 0.89
SDF2L1-201ENST00000248958 PGAM5Q96HS1 289 aa20.59■□□□□ 0.89
SDF2L1-201ENST00000248958 MEGF10Q96KG7 1140 aa20.59■□□□□ 0.89
SDF2L1-201ENST00000248958 HRASLS5Q96KN8 279 aa20.59■□□□□ 0.89
SDF2L1-201ENST00000248958 ZNF391Q9UJN7 358 aa20.59■□□□□ 0.89
SDF2L1-201ENST00000248958 KLHDC2Q9Y2U9 406 aa20.59■□□□□ 0.89
SDF2L1-201ENST00000248958 ZANQ9Y493 2812 aa20.58■□□□□ 0.89
SDF2L1-201ENST00000248958 ACOD1A6NK06 481 aa20.58■□□□□ 0.89
SDF2L1-201ENST00000248958 GMDSO60547 372 aa20.58■□□□□ 0.89
SDF2L1-201ENST00000248958 LMX1BO60663 402 aa20.58■□□□□ 0.89
SDF2L1-201ENST00000248958 TGFAP01135 160 aa20.58■□□□□ 0.89
SDF2L1-201ENST00000248958 IL2RGP31785 369 aa20.58■□□□□ 0.89
SDF2L1-201ENST00000248958 CDH15P55291 814 aa20.58■□□□□ 0.89
SDF2L1-201ENST00000248958 PSMA6P60900 246 aaKnown RBP20.58■□□□□ 0.89
SDF2L1-201ENST00000248958 ROM1Q03395 351 aa20.58■□□□□ 0.89
SDF2L1-201ENST00000248958 POU4F2Q12837 409 aa20.58■□□□□ 0.89
SDF2L1-201ENST00000248958 SNCBQ16143 134 aa20.58■□□□□ 0.89
SDF2L1-201ENST00000248958 BCDIN3DQ7Z5W3 292 aaKnown RBP20.58■□□□□ 0.89
SDF2L1-201ENST00000248958 RFKQ969G6 155 aa20.58■□□□□ 0.89
SDF2L1-201ENST00000248958 ERGIC1Q969X5 290 aa20.58■□□□□ 0.89
SDF2L1-201ENST00000248958 SGK3Q96BR1 496 aa20.58■□□□□ 0.89
SDF2L1-201ENST00000248958 RAB39BQ96DA2 213 aa20.58■□□□□ 0.89
SDF2L1-201ENST00000248958 REEP6Q96HR9 211 aa20.58■□□□□ 0.89
SDF2L1-201ENST00000248958 IMPAD1Q9NX62 359 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms