RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 THOC3Q96J01 351 aaKnown RBP13.35□□□□□ -0.27
DDX49-201ENST00000247003 EXO5Q9H790 373 aa13.35□□□□□ -0.27
DDX49-201ENST00000247003 DLL4Q9NR61 685 aa13.35□□□□□ -0.27
DDX49-201ENST00000247003 TTC28Q96AY4 2481 aa13.35□□□□□ -0.27
DDX49-201ENST00000247003 WDR87Q6ZQQ6 2873 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 PMS2P1A4D2B8 440 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 C21orf140B9A014 251 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 C9orf172C9J069 976 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 PYCARD-AS1I3L0S3 204 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 ABOP16442 354 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 CTSSP25774 331 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 SUCLG1P53597 346 aaKnown RBP13.34□□□□□ -0.27
DDX49-201ENST00000247003 B3GALT5-AS1P59052 145 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 PLA2G2CQ5R387 149 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 PHYHD1Q5SRE7 291 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 ZNF529Q6P280 563 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 Q6ZTK2 550 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 ZNF767PQ75MW2 155 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 C20orf196Q8IYI0 205 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 SPICQ8N5J4 248 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 PNLDC1Q8NA58 520 aaKnown RBP13.34□□□□□ -0.27
DDX49-201ENST00000247003 CHST4Q8NCG5 386 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 CCDC107Q8WV48 283 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 SPTSSAQ969W0 71 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 MS4A3Q96HJ5 214 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 GPR87Q9BY21 358 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 FOXD3Q9UJU5 478 aaPredicted RBP13.34□□□□□ -0.27
DDX49-201ENST00000247003 NPTNQ9Y639 398 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 ZNF736B4DX44 427 aaPredicted RBP13.34□□□□□ -0.27
DDX49-201ENST00000247003 F5H5K5 113 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 TSC22D2O75157 780 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 FCER2P06734 321 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 GSK3AP49840 483 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 ZP1P60852 638 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 ENDOGQ14249 297 aaKnown RBP13.34□□□□□ -0.27
DDX49-201ENST00000247003 PDSS1Q5T2R2 415 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 LAMTOR1Q6IAA8 161 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 OR2W3Q7Z3T1 314 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 ANGPTL5Q86XS5 388 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 OR4D10Q8NGI6 311 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 OR2T35Q8NGX2 323 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 OR2V1Q8NHB1 315 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 DVL3Q92997 716 aaPredicted RBP13.34□□□□□ -0.27
DDX49-201ENST00000247003 NABP1Q96AH0 204 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 GPER1Q99527 375 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 NPDC1Q9NQX5 325 aaPredicted RBP13.34□□□□□ -0.27
DDX49-201ENST00000247003 PLEK2Q9NYT0 353 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 LRFN1Q9P244 771 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 MRPS28Q9Y2Q9 187 aaKnown RBP13.34□□□□□ -0.27
DDX49-201ENST00000247003 MRPS18CQ9Y3D5 142 aaKnown RBP13.34□□□□□ -0.27
DDX49-201ENST00000247003 RHBDD3Q9Y3P4 386 aa13.34□□□□□ -0.27
DDX49-201ENST00000247003 TMEM235A6NFC5 223 aa13.33□□□□□ -0.28
DDX49-201ENST00000247003 LRRC3CA6NJW4 275 aa13.33□□□□□ -0.28
DDX49-201ENST00000247003 AKR7A2O43488 359 aa13.33□□□□□ -0.28
DDX49-201ENST00000247003 AMY2AP04746 511 aa13.33□□□□□ -0.28
DDX49-201ENST00000247003 VSIG8P0DPA2 414 aa13.33□□□□□ -0.28
DDX49-201ENST00000247003 CD59P13987 128 aa13.33□□□□□ -0.28
DDX49-201ENST00000247003 CNR1P21554 472 aa13.33□□□□□ -0.28
DDX49-201ENST00000247003 MRPS34P82930 218 aaKnown RBP13.33□□□□□ -0.28
DDX49-201ENST00000247003 MEF2DQ14814 521 aa13.33□□□□□ -0.28
DDX49-201ENST00000247003 MOGAT2Q3SYC2 334 aa13.33□□□□□ -0.28
DDX49-201ENST00000247003 ABHD17BQ5VST6 288 aa13.33□□□□□ -0.28
DDX49-201ENST00000247003 GGNQ86UU5 652 aa13.33□□□□□ -0.28
DDX49-201ENST00000247003 GPR137CQ8N3F9 429 aa13.33□□□□□ -0.28
DDX49-201ENST00000247003 CCDC54Q8NEL0 328 aa13.33□□□□□ -0.28
DDX49-201ENST00000247003 CDC6Q99741 560 aa13.33□□□□□ -0.28
DDX49-201ENST00000247003 SLC25A21Q9BQT8 299 aaPredicted RBP13.33□□□□□ -0.28
DDX49-201ENST00000247003 NUDT16L1Q9BRJ7 211 aaKnown RBP13.33□□□□□ -0.28
DDX49-201ENST00000247003 ZMAT3Q9HA38 289 aaKnown RBP13.33□□□□□ -0.28
DDX49-201ENST00000247003 IFT46Q9NQC8 304 aa13.33□□□□□ -0.28
DDX49-201ENST00000247003 FOXJ2Q9P0K8 574 aa13.33□□□□□ -0.28
DDX49-201ENST00000247003 B4GALT7Q9UBV7 327 aa13.33□□□□□ -0.28
DDX49-201ENST00000247003 FBLN5Q9UBX5 448 aa13.33□□□□□ -0.28
DDX49-201ENST00000247003 A0A0U1RQV5 110 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 DISC1C4P0D8 188 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 CXCL13O43927 109 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 MTRF1O75570 445 aaKnown RBP13.32□□□□□ -0.28
DDX49-201ENST00000247003 GIPP09681 153 aaPredicted RBP13.32□□□□□ -0.28
DDX49-201ENST00000247003 UBBP0CG47 229 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 UNC119Q13432 240 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 WIPI1Q5MNZ9 446 aaPredicted RBP13.32□□□□□ -0.28
DDX49-201ENST00000247003 NLRC3Q7RTR2 1065 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 TRAPPC6BQ86SZ2 158 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 AQP3Q92482 292 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 CPNE4Q96A23 557 aaPredicted RBP13.32□□□□□ -0.28
DDX49-201ENST00000247003 CHIAQ9BZP6 476 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 TMEM165Q9HC07 324 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 EIF3KQ9UBQ5 218 aaKnown RBP13.32□□□□□ -0.28
DDX49-201ENST00000247003 FLVCR1Q9Y5Y0 555 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 OR5H15A6NDH6 313 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 A6NL46 340 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 LINC01387J3KSC0 135 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 M0R135 149 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 MT-CO3P00414 261 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 CHRM2P08172 466 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 C4BPBP20851 252 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 THBS4P35443 961 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 ZNF260Q3ZCT1 412 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 C4orf46Q504U0 113 aa13.32□□□□□ -0.28
DDX49-201ENST00000247003 FAM27BQ5VT28 67 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms