RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 SLC16A7O60669 478 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 MPZL1O95297 269 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 MECP2P51608 486 aaKnown RBP12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 MGAT2Q10469 447 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 PMPCAQ10713 525 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 SPNS3Q6ZMD2 512 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 GALNTL5Q7Z4T8 443 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 ARL6IP6Q8N6S5 226 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 MITD1Q8WV92 249 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 RRNAD1Q96FB5 475 aaKnown RBP12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 DCBLD2Q96PD2 775 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 OR2M4Q96R27 311 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 SLC25A21Q9BQT8 299 aaPredicted RBP12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 KLK13Q9UKR3 277 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 PIAS3Q9Y6X2 628 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 REV3LO60673 3130 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 PRSS38A1L453 326 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 MFNGO00587 321 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 NKX2-2O95096 273 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 ALOX5APP20292 161 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 DVL1P1P54792 670 aaPredicted RBP12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 ZNF684Q5T5D7 378 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 TRAPPC6BQ86SZ2 158 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 TMEM104Q8NE00 496 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 C4orf45Q96LM5 186 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 NMNAT2Q9BZQ4 307 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 CREBZFQ9NS37 354 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 PILRAQ9UKJ1 303 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 TRBV5-5A0A0J9YX44 114 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 SERINC4A6NH21 518 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 CYR61O00622 381 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 SLC17A2O00624 439 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 ARPC3O15145 178 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 SFTPBP07988 381 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 LSM6P62312 80 aaKnown RBP12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 MFGE8Q08431 387 aaPredicted RBP12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 CD226Q15762 336 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 NPSR1Q6W5P4 371 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 BCO1Q9HAY6 547 aa12.69□□□□□ -0.38
PCDHB3-201ENST00000231130 PRUNE2Q8WUY3 3088 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 A0A1W2PPC1 479 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 SMCO3A2RU48 225 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 ADAP1O75689 374 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 GIMD1P0DJR0 217 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 HRH1P35367 487 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 ELOCQ15369 112 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 LPCAT3Q6P1A2 487 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 LINC00346Q8IVM7 164 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 SLC30A7Q8NEW0 376 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 ANKRD9Q96BM1 317 aaPredicted RBP12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 TSPAN32Q96QS1 320 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 EGLN1Q9GZT9 426 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 SIRT7Q9NRC8 400 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 EMC9Q9Y3B6 208 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 IGKV1D-42A0A075B6H8 117 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 METTL12A8MUP2 240 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 ZNF587BE7ETH6 402 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 STK17BO94768 372 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 ABHD16AO95870 558 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 AK1P00568 194 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 FAM157CP0CG43 387 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 AFF3P51826 1226 aaKnown RBP12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 FJX1Q86VR8 437 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 ZSCAN4Q8NAM6 433 aaPredicted RBP12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 MARCH1Q8TCQ1 289 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 METTL21AQ8WXB1 218 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 SLC39A7Q92504 469 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 TCTN2Q96GX1 697 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 GAL3ST4Q96RP7 486 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 KIR3DX1Q9H7L2 352 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 CEP290O15078 2479 aa12.68□□□□□ -0.38
PCDHB3-201ENST00000231130 IFITM10A6NMD0 228 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 TMEM225Q6GV28 225 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 OR2T2Q6IF00 324 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 CDC20BQ86Y33 519 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 CA13Q8N1Q1 262 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 OR13C3Q8NGS6 347 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 ZNF524Q96C55 264 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 PTGES2Q9H7Z7 377 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 VSX1Q9NZR4 365 aaPredicted RBP12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 CRHP06850 196 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 GNB3P16520 340 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 HGFACQ04756 655 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 ZNF74Q16587 644 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 KHDC3LQ587J8 217 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 LYG2Q86SG7 212 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 OR1J1Q8NGS3 322 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 MR1Q95460 341 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 SLC22A18Q96BI1 424 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 NEU1Q99519 415 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 CERS4Q9HA82 394 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 ZNF354AO60765 605 aaPredicted RBP12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 TACR3P29371 465 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 RGS19P49795 217 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 RPS21P63220 83 aaKnown RBP12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 RASGEF1BQ0VAM2 473 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 ZNF343Q6P1L6 599 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 CHRDL2Q6WN34 429 aa12.67□□□□□ -0.38
PCDHB3-201ENST00000231130 PRSS58Q8IYP2 241 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms