RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 PRSS12P56730 875 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 MALLQ13021 153 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 HLXQ14774 488 aaPredicted RBP23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 TIGD6Q17RP2 521 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 ZNF672Q499Z4 452 aaPredicted RBP23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 OR5L1Q8NGL2 311 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 TMEM171Q8WVE6 324 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 AKAP1Q92667 903 aaKnown RBP eCLIP23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 A0A087WXM4 84 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 PNMA8CA0A1B0GUJ8 204 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 ACOD1A6NK06 481 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 CTAG2O75638 210 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 TTRP02766 147 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 HSMCR30P0CW71 290 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 PCMT1P22061 227 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 RPS23P62266 143 aaKnown RBP23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 ALKBH1Q13686 389 aaKnown RBP23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 RGS7BPQ6MZT1 257 aaPredicted RBP23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 ZNF544Q6NX49 715 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 FDX2Q6P4F2 183 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 COMMD2Q86X83 199 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 HAVCR2Q8TDQ0 301 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 COG8Q96MW5 612 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 ST6GALNAC2Q9UJ37 374 aa23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 SIRT4Q9Y6E7 314 aaPredicted RBP23.44■■□□□ 1.34
CHMP4B-201ENST00000217402 TGM4P49221 684 aa23.43■■□□□ 1.34
CHMP4B-201ENST00000217402 ZNF92Q03936 586 aa23.43■■□□□ 1.34
CHMP4B-201ENST00000217402 MSMPQ1L6U9 139 aa23.43■■□□□ 1.34
CHMP4B-201ENST00000217402 ELMOD2Q8IZ81 293 aa23.43■■□□□ 1.34
CHMP4B-201ENST00000217402 SGK3Q96BR1 496 aa23.43■■□□□ 1.34
CHMP4B-201ENST00000217402 REEP6Q96HR9 211 aa23.43■■□□□ 1.34
CHMP4B-201ENST00000217402 CISD1Q9NZ45 108 aaKnown RBP23.43■■□□□ 1.34
CHMP4B-201ENST00000217402 ABCA4P78363 2273 aa23.42■■□□□ 1.34
CHMP4B-201ENST00000217402 FAM221AA4D161 298 aa23.42■■□□□ 1.34
CHMP4B-201ENST00000217402 H3BSH0 61 aa23.42■■□□□ 1.34
CHMP4B-201ENST00000217402 XRCC2O43543 280 aa23.42■■□□□ 1.34
CHMP4B-201ENST00000217402 FABP6P51161 128 aa23.42■■□□□ 1.34
CHMP4B-201ENST00000217402 GK2Q14410 553 aaPredicted RBP23.42■■□□□ 1.34
CHMP4B-201ENST00000217402 CDK5R1Q15078 307 aa23.42■■□□□ 1.34
CHMP4B-201ENST00000217402 NEDD8Q15843 81 aa23.42■■□□□ 1.34
CHMP4B-201ENST00000217402 RPL22L1Q6P5R6 122 aaKnown RBP23.42■■□□□ 1.34
CHMP4B-201ENST00000217402 ZNF367Q7RTV3 350 aa23.42■■□□□ 1.34
CHMP4B-201ENST00000217402 TMEM200AQ86VY9 491 aa23.42■■□□□ 1.34
CHMP4B-201ENST00000217402 ZNF295-AS1Q8N0V1 137 aa23.42■■□□□ 1.34
CHMP4B-201ENST00000217402 OR51E1Q8TCB6 317 aa23.42■■□□□ 1.34
CHMP4B-201ENST00000217402 MARS2Q96GW9 593 aaKnown RBP23.42■■□□□ 1.34
CHMP4B-201ENST00000217402 CLEC4MQ9H2X3 399 aaPredicted RBP23.42■■□□□ 1.34
CHMP4B-201ENST00000217402 TRBV2A0A0J9YWF9 115 aa23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 P2RY10O00398 339 aa23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 MPV17P39210 176 aa23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 TAS2R43P59537 309 aa23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 CCDC58Q4VC31 144 aa23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 KCTD8Q6ZWB6 473 aa23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 MRPL21Q7Z2W9 205 aaKnown RBP23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 KLF14Q8TD94 323 aaPredicted RBP23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 ZNF442Q9H7R0 627 aa23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 PTPN13Q12923 2485 aa23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 HRNRQ86YZ3 2850 aaPredicted RBP23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 ROS1P08922 2347 aa23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 CCR9P51686 369 aa23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 TLE4Q04727 773 aa23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 C1orf174Q8IYL3 243 aa23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 RDH10Q8IZV5 341 aa23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 MARVELD3Q96A59 401 aa23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 LYZL4Q96KX0 146 aa23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 PDCD1LG2Q9BQ51 273 aa23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 GPR84Q9NQS5 396 aa23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 CMAHPQ9Y471 501 aa23.41■■□□□ 1.34
CHMP4B-201ENST00000217402 PLCE1Q9P212 2302 aa23.4■■□□□ 1.34
CHMP4B-201ENST00000217402 A0A0U1RQV5 110 aa23.4■■□□□ 1.34
CHMP4B-201ENST00000217402 MAGEA13PA6NCF6 341 aa23.4■■□□□ 1.34
CHMP4B-201ENST00000217402 OR4C45A6NMZ5 311 aa23.4■■□□□ 1.34
CHMP4B-201ENST00000217402 SMIM18P0DKX4 95 aa23.4■■□□□ 1.34
CHMP4B-201ENST00000217402 GCH1P30793 250 aa23.4■■□□□ 1.34
CHMP4B-201ENST00000217402 SLC3A1Q07837 685 aa23.4■■□□□ 1.34
CHMP4B-201ENST00000217402 ADIPOQQ15848 244 aa23.4■■□□□ 1.34
CHMP4B-201ENST00000217402 ZNF718Q3SXZ3 478 aa23.4■■□□□ 1.34
CHMP4B-201ENST00000217402 ZNF787Q6DD87 383 aa23.4■■□□□ 1.34
CHMP4B-201ENST00000217402 PGAP1Q75T13 922 aa23.4■■□□□ 1.34
CHMP4B-201ENST00000217402 ZNF676Q8N7Q3 588 aa23.4■■□□□ 1.34
CHMP4B-201ENST00000217402 CMBLQ96DG6 245 aa23.4■■□□□ 1.34
CHMP4B-201ENST00000217402 MGLLQ99685 303 aa23.4■■□□□ 1.34
CHMP4B-201ENST00000217402 SYT3Q9BQG1 590 aa23.4■■□□□ 1.34
CHMP4B-201ENST00000217402 SOX7Q9BT81 388 aa23.4■■□□□ 1.34
CHMP4B-201ENST00000217402 UBTD1Q9HAC8 227 aa23.4■■□□□ 1.34
CHMP4B-201ENST00000217402 DUSP13Q9UII6 198 aa23.4■■□□□ 1.34
CHMP4B-201ENST00000217402 ZFPL1O95159 310 aa23.39■■□□□ 1.33
CHMP4B-201ENST00000217402 OR4A8P0C604 315 aa23.39■■□□□ 1.33
CHMP4B-201ENST00000217402 CELP19835 753 aa23.39■■□□□ 1.33
CHMP4B-201ENST00000217402 BDH1Q02338 343 aa23.39■■□□□ 1.33
CHMP4B-201ENST00000217402 ACSM1Q08AH1 577 aa23.39■■□□□ 1.33
CHMP4B-201ENST00000217402 UBE2UQ5VVX9 321 aa23.39■■□□□ 1.33
CHMP4B-201ENST00000217402 LRP11Q86VZ4 500 aa23.39■■□□□ 1.33
CHMP4B-201ENST00000217402 FCGR1BQ92637 280 aa23.39■■□□□ 1.33
CHMP4B-201ENST00000217402 FBXW5Q969U6 566 aa23.39■■□□□ 1.33
CHMP4B-201ENST00000217402 SMIM19Q96E16 107 aa23.39■■□□□ 1.33
CHMP4B-201ENST00000217402 FAM71F1Q96KD3 344 aaPredicted RBP23.39■■□□□ 1.33
CHMP4B-201ENST00000217402 RGCCQ9H4X1 137 aa23.39■■□□□ 1.33
CHMP4B-201ENST00000217402 OGG1O15527 345 aa23.38■■□□□ 1.33
CHMP4B-201ENST00000217402 INMTO95050 263 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms