RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 SOD1P00441 154 aa13.35□□□□□ -0.27
SPTLC2-201ENST00000216484 CD38P28907 300 aa13.35□□□□□ -0.27
SPTLC2-201ENST00000216484 FOXK2Q01167 660 aa13.35□□□□□ -0.27
SPTLC2-201ENST00000216484 TMEM267Q0VDI3 215 aaPredicted RBP13.35□□□□□ -0.27
SPTLC2-201ENST00000216484 DHRS13Q6UX07 377 aa13.35□□□□□ -0.27
SPTLC2-201ENST00000216484 DTD2Q96FN9 168 aa13.35□□□□□ -0.27
SPTLC2-201ENST00000216484 CLEC2DQ9UHP7 191 aa13.35□□□□□ -0.27
SPTLC2-201ENST00000216484 AKR7A3O95154 331 aa13.35□□□□□ -0.27
SPTLC2-201ENST00000216484 FAM157BP0CG42 384 aa13.35□□□□□ -0.27
SPTLC2-201ENST00000216484 HOXD13P35453 343 aa13.35□□□□□ -0.27
SPTLC2-201ENST00000216484 DLX1P56177 255 aa13.35□□□□□ -0.27
SPTLC2-201ENST00000216484 CXorf58Q96LI9 332 aa13.35□□□□□ -0.27
SPTLC2-201ENST00000216484 MS4A10Q96PG2 267 aa13.35□□□□□ -0.27
SPTLC2-201ENST00000216484 FAM221AA4D161 298 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 CORO6Q6QEF8 472 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 ICAM5Q9UMF0 924 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 ANKRD36A6QL64 1941 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 NRASP01111 189 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 PITX1P78337 314 aaPredicted RBP13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 RPEL1Q2QD12 228 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 LYSMD2Q8IV50 215 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 TCRBV3S1A0A5B6 114 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 TMEM64Q6YI46 380 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 OR52I2Q8NH67 350 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 LCORQ96JN0 433 aaPredicted RBP13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 EMC6Q9BV81 110 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 TMEM65Q6PI78 240 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 ZNF429Q86V71 674 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 ANKRD34CP0C6C1 535 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 SFTA3P0C7M3 94 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 TTC32Q5I0X7 151 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 RBPMS2Q6ZRY4 209 aaKnown RBP13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 NPEPL1Q8NDH3 523 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 AGBL5Q8NDL9 886 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 SLAMF8Q9P0V8 285 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 PSORS1C1Q9UIG5 152 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 SLC22A13Q9Y226 551 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 MRPS2Q9Y399 296 aaKnown RBP13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 PTBP1P26599 531 aaKnown RBP eCLIP13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 G6PCP35575 357 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 PJVKQ0ZLH3 352 aa13.34□□□□□ -0.27
SPTLC2-201ENST00000216484 ST8SIA5O15466 376 aa13.33□□□□□ -0.27
SPTLC2-201ENST00000216484 CD37P11049 281 aa13.33□□□□□ -0.27
SPTLC2-201ENST00000216484 OR2A2Q6IF42 318 aa13.33□□□□□ -0.27
SPTLC2-201ENST00000216484 HSD11B1LQ7Z5J1 315 aa13.33□□□□□ -0.27
SPTLC2-201ENST00000216484 ARL6IP6Q8N6S5 226 aa13.33□□□□□ -0.27
SPTLC2-201ENST00000216484 ZNF511Q8NB15 262 aa13.33□□□□□ -0.27
SPTLC2-201ENST00000216484 M0R143 59 aa13.33□□□□□ -0.27
SPTLC2-201ENST00000216484 LYZL6O75951 148 aa13.33□□□□□ -0.27
SPTLC2-201ENST00000216484 PI3P19957 117 aa13.33□□□□□ -0.27
SPTLC2-201ENST00000216484 TMEM40Q8WWA1 233 aa13.33□□□□□ -0.27
SPTLC2-201ENST00000216484 CNTD2Q9H8S5 307 aa13.33□□□□□ -0.27
SPTLC2-201ENST00000216484 COA3Q9Y2R0 106 aaPredicted RBP13.33□□□□□ -0.27
SPTLC2-201ENST00000216484 RPS23P62266 143 aaKnown RBP13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 LRRC26Q2I0M4 334 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 MIDNQ504T8 468 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 RAB37Q96AX2 223 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 GSX2Q9BZM3 304 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 H3BP45 60 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 RHBDL1O75783 438 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 TBXA2RP21731 343 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 ACHEP22303 614 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 CXCL12P48061 93 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 CAMPP49913 170 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 SLC16A12Q6ZSM3 486 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 RTN4IP1Q8WWV3 396 aaPredicted RBP13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 NDRG3Q9UGV2 375 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 SLC10A3P09131 477 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 UBE2MP61081 183 aaKnown RBP13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 PRDX4Q13162 271 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 MARCH3Q86UD3 253 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 GATA6Q92908 595 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 EDEM2Q9BV94 578 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 TMEM140Q9NV12 185 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 Q9Y3F1 56 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 M0R1X1 148 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 ZNF195O14628 629 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 ADRA1AP35348 466 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 HOXA4Q00056 320 aaPredicted RBP13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 KLRB1Q12918 225 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 ZNF547Q8IVP9 402 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 PIGAP37287 484 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 DOK3Q7L591 496 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 OR1N2Q8NGR9 330 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 OR13F1Q8NGS4 319 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 SPACA9Q96E40 222 aaPredicted RBP13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 IFT22Q9H7X7 185 aa13.33□□□□□ -0.28
SPTLC2-201ENST00000216484 A0A096LPE4 126 aa13.32□□□□□ -0.28
SPTLC2-201ENST00000216484 A0A1W2PPZ6 126 aa13.32□□□□□ -0.28
SPTLC2-201ENST00000216484 AQP9O43315 295 aa13.32□□□□□ -0.28
SPTLC2-201ENST00000216484 C1QBP02746 253 aa13.32□□□□□ -0.28
SPTLC2-201ENST00000216484 UQCRFS1P47985 274 aa13.32□□□□□ -0.28
SPTLC2-201ENST00000216484 LAIR1Q6GTX8 287 aa13.32□□□□□ -0.28
SPTLC2-201ENST00000216484 WFDC8Q8IUA0 241 aa13.32□□□□□ -0.28
SPTLC2-201ENST00000216484 CLRN3Q8NCR9 226 aa13.32□□□□□ -0.28
SPTLC2-201ENST00000216484 OR4F17Q8NGA8 305 aa13.32□□□□□ -0.28
SPTLC2-201ENST00000216484 OR52L2PQ8NGH6 319 aa13.32□□□□□ -0.28
SPTLC2-201ENST00000216484 RDH5Q92781 318 aa13.32□□□□□ -0.28
SPTLC2-201ENST00000216484 PRSS16Q9NQE7 514 aa13.32□□□□□ -0.28
SPTLC2-201ENST00000216484 MST1RQ04912 1400 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms