RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 SCRN3Q0VDG4 424 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 GPR176Q14439 515 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 PLEKHN1Q494U1 663 aaPredicted RBP17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 SLC16A14Q7RTX9 510 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 ZNF100Q8IYN0 542 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 DNAAF1Q8NEP3 725 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 OR5M9Q8NGP3 310 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 FGFBP3Q8TAT2 258 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 RFT1Q96AA3 541 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 DMRTB1Q96MA1 342 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 MARVELD1Q9BSK0 173 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 C12orf49Q9H741 205 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 ABRACLQ9P1F3 81 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 SYNGR3O43761 229 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 HLA-DMAP28067 261 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 RAB35Q15286 201 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 STK11Q15831 433 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 C9orf135Q5VTT2 229 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 PYHIN1Q6K0P9 492 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 RPUSD3Q6P087 351 aaKnown RBP17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 NAA40Q86UY6 237 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 OR51E1Q8TCB6 317 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 UBASH3BQ8TF42 649 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 GMPPAQ96IJ6 420 aaPredicted RBP17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 UPB1Q9UBR1 384 aa17.23■□□□□ 0.35
TNFRSF1A-201ENST00000162749 SPTA1P02549 2419 aa17.22■□□□□ 0.35
TNFRSF1A-201ENST00000162749 LMX1BO60663 402 aa17.22■□□□□ 0.35
TNFRSF1A-201ENST00000162749 ANXA2P07355 339 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1A-201ENST00000162749 DBHP09172 617 aa17.22■□□□□ 0.35
TNFRSF1A-201ENST00000162749 ARF1P84077 181 aaKnown RBP17.22■□□□□ 0.35
TNFRSF1A-201ENST00000162749 FAPQ12884 760 aa17.22■□□□□ 0.35
TNFRSF1A-201ENST00000162749 HES5Q5TA89 166 aa17.22■□□□□ 0.35
TNFRSF1A-201ENST00000162749 ZNF774Q6NX45 483 aa17.22■□□□□ 0.35
TNFRSF1A-201ENST00000162749 FAM57BQ71RH2 274 aa17.22■□□□□ 0.35
TNFRSF1A-201ENST00000162749 ZNF627Q7L945 461 aa17.22■□□□□ 0.35
TNFRSF1A-201ENST00000162749 P4HA3Q7Z4N8 544 aa17.22■□□□□ 0.35
TNFRSF1A-201ENST00000162749 LUZP2Q86TE4 346 aa17.22■□□□□ 0.35
TNFRSF1A-201ENST00000162749 EXTL1Q92935 676 aa17.22■□□□□ 0.35
TNFRSF1A-201ENST00000162749 TRIB1Q96RU8 372 aa17.22■□□□□ 0.35
TNFRSF1A-201ENST00000162749 RANGRFQ9HD47 186 aaPredicted RBP17.22■□□□□ 0.35
TNFRSF1A-201ENST00000162749 LUZP4Q9P127 313 aa17.22■□□□□ 0.35
TNFRSF1A-201ENST00000162749 TP53TG5Q9Y2B4 290 aa17.22■□□□□ 0.35
TNFRSF1A-201ENST00000162749 ALG5Q9Y673 324 aa17.22■□□□□ 0.35
TNFRSF1A-201ENST00000162749 A0A1B0GTI1 187 aa17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 E9PLN8 166 aa17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 EEF1E1O43324 174 aaKnown RBP17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 SYT7O43581 403 aa17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 FARS2O95363 451 aaKnown RBP17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 CRYGSP22914 178 aa17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 SLC6A9P48067 706 aa17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 PSG4Q00888 419 aa17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 SF3B4Q15427 424 aaKnown RBP eCLIP17.21■□□□□ 0.358e-7■■■□□ 18.2
TNFRSF1A-201ENST00000162749 TBR1Q16650 682 aa17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 FYTTD1Q96QD9 318 aaKnown RBP17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 TP63Q9H3D4 680 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 ZNF275Q9NSD4 429 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 ZNF224Q9NZL3 707 aa17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 PRSS50Q9UI38 385 aa17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 ANXA2P2A6NMY6 339 aa17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 M0R135 149 aa17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 MMP7P09237 267 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 FSTP19883 344 aa17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 SLC6A1P30531 599 aa17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 ABHD12BQ7Z5M8 362 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 CAPSLQ8WWF8 208 aa17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 ZNF799Q96GE5 643 aa17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 TAS2R4Q9NYW5 299 aa17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 SPATA2Q9UM82 520 aa17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 TIMM10BQ9Y5J6 103 aa17.21■□□□□ 0.35
TNFRSF1A-201ENST00000162749 SS18L1O75177 396 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 IGFBP3P17936 291 aaPredicted RBP17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 SRP9P49458 86 aaKnown RBP17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 PCBD1P61457 104 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 SLC36A2Q495M3 483 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 ZFP69Q49AA0 526 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 GCNT2Q8N0V5 402 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 AKR7LQ8NHP1 331 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 SPTSSAQ969W0 71 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 SOX7Q9BT81 388 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 BEX2Q9BXY8 128 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 OR2H1Q9GZK4 316 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 GPR84Q9NQS5 396 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 SLC17A5Q9NRA2 495 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 GLRX2Q9NS18 164 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 CKLFQ9UBR5 152 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 FOXJ3Q9UPW0 622 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 C5orf63A6NC05 138 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 OR14I1A6ND48 311 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 OR6C6A6NF89 314 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 GSTT2P0CG29 244 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 GSTT2BP0CG30 244 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 BTCP35070 178 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 SFRP5Q5T4F7 317 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 OR1F12Q8NHA8 337 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 LGALS14Q8TCE9 139 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 ABCG5Q9H222 651 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 LIN7BQ9HAP6 207 aa17.2■□□□□ 0.34
TNFRSF1A-201ENST00000162749 A0A096LPE4 126 aa17.19■□□□□ 0.34
TNFRSF1A-201ENST00000162749 A0A1B0GVI7 797 aa17.19■□□□□ 0.34
TNFRSF1A-201ENST00000162749 A0A1W2PPZ6 126 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms