RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 LIPT2A6NK58 231 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 C10orf142B7Z368 130 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 SCRG1O75711 98 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 SRFP11831 508 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 ZNF121P58317 390 aaPredicted RBP7.35□□□□□ -1.23
CDC27-201ENST00000066544 SLC22A24Q8N4F4 322 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 OR5D14Q8NGL3 314 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 OR4K15Q8NH41 348 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 THAP6Q8TBB0 222 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 ANKUB1A6NFN9 424 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 OR6C65A6NJZ3 312 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 BCAT2O15382 392 aaPredicted RBP7.35□□□□□ -1.23
CDC27-201ENST00000066544 NUDT21O43809 227 aaKnown RBP7.35□□□□□ -1.23
CDC27-201ENST00000066544 SRSF10O75494 262 aaKnown RBP7.35□□□□□ -1.23
CDC27-201ENST00000066544 GLB1P16278 677 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 SERPINF1P36955 418 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 CLDN6P56747 220 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 TAGLNQ01995 201 aaKnown RBP7.35□□□□□ -1.23
CDC27-201ENST00000066544 BHLHE23Q8NDY6 225 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 OR6K3Q8NGY3 331 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 MFSD8Q8NHS3 518 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 PRRT1Q99946 306 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 UCK1Q9HA47 277 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 GSKIPQ9P0R6 139 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 LHFPL6Q9Y693 200 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 A0A0B4J2A0 478 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 ATP6V1G2-DDX39BF2Z307 99 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 LDLRAD4O15165 306 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 ZNF205O95201 554 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 RPA2P15927 270 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 FSTP19883 344 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 LAP3P28838 519 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 MMP16P51512 607 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 C1orf100Q5SVJ3 147 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 CLVS2Q5SYC1 327 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 LCN10Q6JVE6 187 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 C11orf87Q6NUJ2 197 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 GUSBP11Q6P575 273 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 LRRC18Q8N456 261 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 MRGPRFQ96AM1 343 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 SHPKQ9UHJ6 478 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 FREM2Q5SZK8 3169 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 QDPRP09417 244 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 TOMM20Q15388 145 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 OR2W3Q7Z3T1 314 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 LYG2Q86SG7 212 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 TMEM200AQ86VY9 491 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 OR4K17Q8NGC6 315 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 FBXW5Q969U6 566 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 B3GAT1Q9P2W7 334 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 C9orf170A2RU37 121 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 SULT1C2O00338 296 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 ZNF574Q6ZN55 896 aaPredicted RBP7.35□□□□□ -1.23
CDC27-201ENST00000066544 INO80EQ8NBZ0 244 aaPredicted RBP7.35□□□□□ -1.23
CDC27-201ENST00000066544 OR8B12Q8NGG6 310 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 ST8SIA1Q92185 356 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 DCUN1D4Q92564 292 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 PHB2Q99623 299 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 CYB5R1Q9UHQ9 305 aa7.35□□□□□ -1.23
CDC27-201ENST00000066544 MPTX1A8MV57 137 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 TSPAN9O75954 239 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 PGAM2P15259 253 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 ZNF43P17038 809 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 ZBTB25P24278 435 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 APOBEC1P41238 236 aaKnown RBP7.34□□□□□ -1.23
CDC27-201ENST00000066544 DHPSP49366 369 aaPredicted RBP7.34□□□□□ -1.23
CDC27-201ENST00000066544 RAB12Q6IQ22 244 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 NKAIN3Q8N8D7 197 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 MRPS24Q96EL2 167 aaKnown RBP7.34□□□□□ -1.23
CDC27-201ENST00000066544 ARHGAP5-AS1Q96IT6 56 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 ADAT1Q9BUB4 502 aaKnown RBP7.34□□□□□ -1.23
CDC27-201ENST00000066544 DEFB126Q9BYW3 111 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 ALX4Q9H161 411 aaPredicted RBP7.34□□□□□ -1.23
CDC27-201ENST00000066544 TMEM231Q9H6L2 316 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 EML6Q6ZMW3 1958 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 RNF222A6NCQ9 220 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 ZNF726A6NNF4 738 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 KRBOX1C9JBD0 128 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 SSX5O60225 188 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 GLI4P10075 376 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 AGTR1P30556 359 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 MEF2DQ14814 521 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 MPPED2Q15777 294 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 HDDC2Q7Z4H3 204 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 NAXDQ8IW45 347 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 OR10R2Q8NGX6 335 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 PAQR8Q8TEZ7 354 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 AQP3Q92482 292 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 RAB3CQ96E17 227 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 ZNF208O43345 1280 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 KNG1P01042 644 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 FGF2P09038 288 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 MGMTP16455 207 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 IKZF1Q13422 519 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 MICBQ29980 383 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 PHF19Q5T6S3 580 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 JMJD6Q6NYC1 403 aaPredicted RBP7.34□□□□□ -1.23
CDC27-201ENST00000066544 OR1S2Q8NGQ3 325 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 PIGTQ969N2 578 aa7.34□□□□□ -1.23
CDC27-201ENST00000066544 SLCO5A1Q9H2Y9 848 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms