RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.22□□□□□ -0.29
ERCC1-201ENST00000013807 DBPQ10586 325 aaPredicted RBP13.22□□□□□ -0.29
ERCC1-201ENST00000013807 MPPED2Q15777 294 aa13.22□□□□□ -0.29
ERCC1-201ENST00000013807 TEX30Q5JUR7 227 aa13.22□□□□□ -0.29
ERCC1-201ENST00000013807 FAM201AQ5SY85 155 aa13.22□□□□□ -0.29
ERCC1-201ENST00000013807 ZNF770Q6IQ21 691 aaPredicted RBP13.22□□□□□ -0.29
ERCC1-201ENST00000013807 DRAM2Q6UX65 266 aa13.22□□□□□ -0.29
ERCC1-201ENST00000013807 OR11L1Q8NGX0 322 aa13.22□□□□□ -0.29
ERCC1-201ENST00000013807 SPTSSAQ969W0 71 aa13.22□□□□□ -0.29
ERCC1-201ENST00000013807 CDRT15Q96T59 188 aa13.22□□□□□ -0.29
ERCC1-201ENST00000013807 NUDT16L1Q9BRJ7 211 aaKnown RBP13.22□□□□□ -0.29
ERCC1-201ENST00000013807 SLITRK2Q9H156 845 aa13.22□□□□□ -0.29
ERCC1-201ENST00000013807 MRPL15Q9P015 296 aaKnown RBP13.22□□□□□ -0.29
ERCC1-201ENST00000013807 MMP24Q9Y5R2 645 aa13.22□□□□□ -0.29
ERCC1-201ENST00000013807 CDH10Q9Y6N8 788 aa13.22□□□□□ -0.29
ERCC1-201ENST00000013807 NDUFA2O43678 99 aa13.21□□□□□ -0.29
ERCC1-201ENST00000013807 FAM20BO75063 409 aa13.21□□□□□ -0.29
ERCC1-201ENST00000013807 HLA-DQA2P01906 255 aa13.21□□□□□ -0.29
ERCC1-201ENST00000013807 LIPFP07098 398 aa13.21□□□□□ -0.29
ERCC1-201ENST00000013807 ZNF823P16415 610 aa13.21□□□□□ -0.29
ERCC1-201ENST00000013807 MSX2P35548 267 aaPredicted RBP13.21□□□□□ -0.29
ERCC1-201ENST00000013807 MAGEA2P43356 314 aa13.21□□□□□ -0.29
ERCC1-201ENST00000013807 ZNF92Q03936 586 aa13.21□□□□□ -0.29
ERCC1-201ENST00000013807 KCNJ8Q15842 424 aa13.21□□□□□ -0.29
ERCC1-201ENST00000013807 LYPD2Q6UXB3 125 aa13.21□□□□□ -0.29
ERCC1-201ENST00000013807 ZDHHC21Q8IVQ6 265 aa13.21□□□□□ -0.29
ERCC1-201ENST00000013807 LNX2Q8N448 690 aa13.21□□□□□ -0.29
ERCC1-201ENST00000013807 SPERTQ8NA61 448 aa13.21□□□□□ -0.29
ERCC1-201ENST00000013807 OR2T4Q8NH00 348 aa13.21□□□□□ -0.29
ERCC1-201ENST00000013807 ZNRF4Q8WWF5 429 aa13.21□□□□□ -0.29
ERCC1-201ENST00000013807 DUX5Q96PT3 197 aa13.21□□□□□ -0.29
ERCC1-201ENST00000013807 FN3KQ9H479 309 aa13.21□□□□□ -0.29
ERCC1-201ENST00000013807 TRIM36Q9NQ86 728 aa13.21□□□□□ -0.29
ERCC1-201ENST00000013807 RNF7Q9UBF6 113 aa13.21□□□□□ -0.29
ERCC1-201ENST00000013807 LYVE1Q9Y5Y7 322 aa13.21□□□□□ -0.29
ERCC1-201ENST00000013807 V9GYQ6 96 aa13.21□□□□□ -0.29
ERCC1-201ENST00000013807 IGHV3-64DA0A0J9YX35 117 aa13.2□□□□□ -0.3
ERCC1-201ENST00000013807 WIPF1O43516 503 aa13.2□□□□□ -0.3
ERCC1-201ENST00000013807 CA6P23280 308 aa13.2□□□□□ -0.3
ERCC1-201ENST00000013807 SNAI3Q3KNW1 292 aa13.2□□□□□ -0.3
ERCC1-201ENST00000013807 SLC35F1Q5T1Q4 408 aa13.2□□□□□ -0.3
ERCC1-201ENST00000013807 CD276Q5ZPR3 534 aa13.2□□□□□ -0.3
ERCC1-201ENST00000013807 C16orf87Q6PH81 154 aa13.2□□□□□ -0.3
ERCC1-201ENST00000013807 RASSF6Q6ZTQ3 369 aa13.2□□□□□ -0.3
ERCC1-201ENST00000013807 MRPL21Q7Z2W9 205 aaKnown RBP13.2□□□□□ -0.3
ERCC1-201ENST00000013807 OR52L1Q8NGH7 329 aa13.2□□□□□ -0.3
ERCC1-201ENST00000013807 SPRYD4Q8WW59 207 aaPredicted RBP13.2□□□□□ -0.3
ERCC1-201ENST00000013807 SPSB4Q96A44 273 aa13.2□□□□□ -0.3
ERCC1-201ENST00000013807 BTBD10Q9BSF8 475 aa13.2□□□□□ -0.3
ERCC1-201ENST00000013807 NMNAT2Q9BZQ4 307 aa13.2□□□□□ -0.3
ERCC1-201ENST00000013807 OPA3Q9H6K4 179 aa13.2□□□□□ -0.3
ERCC1-201ENST00000013807 EGLN3Q9H6Z9 239 aa13.2□□□□□ -0.3
ERCC1-201ENST00000013807 UNKLQ9H9P5 680 aaKnown RBP13.2□□□□□ -0.3
ERCC1-201ENST00000013807 FN3KRPQ9HA64 309 aa13.2□□□□□ -0.3
ERCC1-201ENST00000013807 NOX4Q9NPH5 578 aa13.2□□□□□ -0.3
ERCC1-201ENST00000013807 NDE1Q9NXR1 346 aa13.2□□□□□ -0.3
ERCC1-201ENST00000013807 VWFP04275 2813 aa13.19□□□□□ -0.3
ERCC1-201ENST00000013807 TRAV40A0A0B4J280 105 aa13.19□□□□□ -0.3
ERCC1-201ENST00000013807 C22orf46C9J442 243 aa13.19□□□□□ -0.3
ERCC1-201ENST00000013807 LGALS8O00214 317 aa13.19□□□□□ -0.3
ERCC1-201ENST00000013807 ENSAO43768 121 aaKnown RBP13.19□□□□□ -0.3
ERCC1-201ENST00000013807 LHBP01229 141 aa13.19□□□□□ -0.3
ERCC1-201ENST00000013807 MMP9P14780 707 aa13.19□□□□□ -0.3
ERCC1-201ENST00000013807 PRSS12P56730 875 aa13.19□□□□□ -0.3
ERCC1-201ENST00000013807 OR8G1Q15617 311 aa13.19□□□□□ -0.3
ERCC1-201ENST00000013807 PRAMEF6Q5VXH4 476 aa13.19□□□□□ -0.3
ERCC1-201ENST00000013807 RHOUQ7L0Q8 258 aa13.19□□□□□ -0.3
ERCC1-201ENST00000013807 OR4C15Q8NGM1 316 aa13.19□□□□□ -0.3
ERCC1-201ENST00000013807 KCNJ15Q99712 375 aa13.19□□□□□ -0.3
ERCC1-201ENST00000013807 ACTR3BQ9P1U1 418 aa13.19□□□□□ -0.3
ERCC1-201ENST00000013807 KAAG1Q9UBP8 84 aa13.19□□□□□ -0.3
ERCC1-201ENST00000013807 CTSZQ9UBR2 303 aa13.19□□□□□ -0.3
ERCC1-201ENST00000013807 TAGLN3Q9UI15 199 aa13.19□□□□□ -0.3
ERCC1-201ENST00000013807 SOX21Q9Y651 276 aaPredicted RBP13.19□□□□□ -0.3
ERCC1-201ENST00000013807 COMMD3-BMI1R4GMX3 469 aa13.19□□□□□ -0.3
ERCC1-201ENST00000013807 A0A1B0GUS0 222 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 SRRM5B3KS81 715 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 ZNF879B4DU55 563 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 P2RY10O00398 339 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 GASTP01350 101 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 PSKH1P11801 424 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 ANOS1P23352 680 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 FMO3P31513 532 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 PYCR1P32322 319 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 DDOSTP39656 456 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 RPS27P42677 84 aaKnown RBP13.18□□□□□ -0.3
ERCC1-201ENST00000013807 SLC25A1P53007 311 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 FGF12P61328 243 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 OCLNQ16625 522 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 GLYATL3Q5SZD4 288 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 Q6YL49 198 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 PIGWQ7Z7B1 504 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 TMEM86BQ8N661 226 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 CYB561A3Q8NBI2 242 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 SLC37A3Q8NCC5 494 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 PROKR2Q8NFJ6 384 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 OR8D4Q8NGM9 314 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 DMRTB1Q96MA1 342 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 UFSP2Q9NUQ7 469 aa13.18□□□□□ -0.3
ERCC1-201ENST00000013807 ERVK-18Q9QC07 812 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms