RNA–Protein interactions for RNA: ENST00000003302.8

USP28-201, Transcript of ubiquitin specific peptidase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP28, Length 4,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-201ENST00000003302 PLA2G5P39877 138 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 SPEM2Q0P670 501 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 PRAMEF20Q5VT98 475 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 ZNF574Q6ZN55 896 aaPredicted RBP9.46□□□□□ -0.89
USP28-201ENST00000003302 OR5AS1Q8N127 324 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 ZNF441Q8N8Z8 693 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 OR10G3Q8NGC4 313 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 OR1N1Q8NGS0 311 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 SLAMF6Q96DU3 332 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 DPYSL5Q9BPU6 564 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 SAV1Q9H4B6 383 aaPredicted RBP9.46□□□□□ -0.89
USP28-201ENST00000003302 OR2S2Q9NQN1 319 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 PFDN2Q9UHV9 154 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 CSAG2Q9Y5P2 127 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 PMS2P1A4D2B8 440 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 A8MVM7 634 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 CD8AP01732 235 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 PNLIPP16233 465 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 CAPZA2P47755 286 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 NPBWR1P48145 328 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 MRPS21P82921 87 aaKnown RBP9.46□□□□□ -0.89
USP28-201ENST00000003302 PHYHD1Q5SRE7 291 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 NUBPLQ8TB37 319 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 C2CD4CQ8TF44 421 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 FBXO17Q96EF6 278 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 ARHGAP5-AS1Q96IT6 56 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 KLHL13Q9P2N7 655 aa9.46□□□□□ -0.89
USP28-201ENST00000003302 RPH3AQ9Y2J0 694 aaPredicted RBP9.46□□□□□ -0.89
USP28-201ENST00000003302 CLDN6P56747 220 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 ADAMTS20P59510 1910 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 GTF3C1Q12789 2109 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 EMC4Q5J8M3 183 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.46□□□□□ -0.9
USP28-201ENST00000003302 ZNF584Q8IVC4 421 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 SLC43A2Q8N370 569 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 TMEM229BQ8NBD8 167 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 OR5AP2Q8NGF4 316 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 PBOV1Q9GZY1 135 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 LPAR5Q9H1C0 372 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 TMEM14AQ9Y6G1 99 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 KIAA2026Q5HYC2 2103 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 TLCD2A6NGC4 264 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 F5H0A9 414 aaPredicted RBP9.46□□□□□ -0.9
USP28-201ENST00000003302 PMS2P2O95744 297 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 MPIG6BO95866 241 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 NME1P15531 152 aaKnown RBP9.46□□□□□ -0.9
USP28-201ENST00000003302 CNR1P21554 472 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 GLRA1P23415 457 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 RNF4P78317 190 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 ELAVL1Q15717 326 aaKnown RBP9.46□□□□□ -0.9
USP28-201ENST00000003302 ESX1Q8N693 406 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 SMRP1Q8NCR6 262 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 POC1BQ8TC44 478 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 CYTL1Q9NRR1 136 aa9.46□□□□□ -0.9
USP28-201ENST00000003302 BDP1A6H8Y1 2624 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 IGHV1OR21-1A0A087WYE8 117 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 OR5K4A6NMS3 321 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 TSPAN9O75954 239 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 FAUP35544 74 aaKnown RBP9.45□□□□□ -0.9
USP28-201ENST00000003302 HSF1Q00613 529 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 TLE3Q04726 772 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 RNASE10Q5GAN6 216 aaKnown RBP9.45□□□□□ -0.9
USP28-201ENST00000003302 GLT8D1Q68CQ7 371 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 OR2A2Q6IF42 318 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 C20orf196Q8IYI0 205 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 KCNRGQ8N5I3 272 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 PELOQ9BRX2 385 aaKnown RBP9.45□□□□□ -0.9
USP28-201ENST00000003302 CACNA1GO43497 2377 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 LOC390937A0A1W2PQ73 354 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 ATG12O94817 140 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 FOSL2P15408 326 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 MYBPHQ13203 477 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 ABHD12BQ7Z5M8 362 aaPredicted RBP9.45□□□□□ -0.9
USP28-201ENST00000003302 COMMD2Q86X83 199 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 OR8B12Q8NGG6 310 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 OR10R2Q8NGX6 335 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 GPHA2Q96T91 129 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 SERINC1Q9NRX5 453 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 FGF21Q9NSA1 209 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 GUSBP08236 651 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 POLR2HP52434 150 aaKnown RBP9.45□□□□□ -0.9
USP28-201ENST00000003302 MST1LQ2TV78 715 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 AWAT2Q6E213 333 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 HSD17B13Q7Z5P4 300 aaPredicted RBP9.45□□□□□ -0.9
USP28-201ENST00000003302 SLC25A42Q86VD7 318 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 NAXDQ8IW45 347 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 ZNF101Q8IZC7 436 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 STT3BQ8TCJ2 826 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 ESRP2Q9H6T0 727 aaKnown RBP9.45□□□□□ -0.9
USP28-201ENST00000003302 IFT46Q9NQC8 304 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 CYB5R1Q9UHQ9 305 aa9.45□□□□□ -0.9
USP28-201ENST00000003302 A0A1B0GTQ1 180 aa9.44□□□□□ -0.9
USP28-201ENST00000003302 MGMTP16455 207 aa9.44□□□□□ -0.9
USP28-201ENST00000003302 CD38P28907 300 aa9.44□□□□□ -0.9
USP28-201ENST00000003302 GLIPR1L1Q6UWM5 242 aa9.44□□□□□ -0.9
USP28-201ENST00000003302 ST6GALNAC5Q9BVH7 336 aa9.44□□□□□ -0.9
USP28-201ENST00000003302 POTEKPQ9BYX7 375 aa9.44□□□□□ -0.9
USP28-201ENST00000003302 ACKR4Q9NPB9 350 aa9.44□□□□□ -0.9
USP28-201ENST00000003302 WNT16Q9UBV4 365 aa9.44□□□□□ -0.9
USP28-201ENST00000003302 BSNQ9UPA5 3926 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms