RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 NGFP01138 241 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 ANXA2P07355 339 aaKnown RBP10.63□□□□□ -0.71
LINC00339-213ENST00000642137 GLRXP35754 106 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 PSMB10P40306 273 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 MAP2K4P45985 399 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 SLC6A9P48067 706 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 TAS2R43P59537 309 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 BDH1Q02338 343 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 ALKBH1Q13686 389 aaKnown RBP10.63□□□□□ -0.71
LINC00339-213ENST00000642137 RPL22L1Q6P5R6 122 aaKnown RBP10.63□□□□□ -0.71
LINC00339-213ENST00000642137 CATSPERDQ86XM0 798 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 KLBQ86Z14 1044 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 ELMOD2Q8IZ81 293 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 PIAS4Q8N2W9 510 aaPredicted RBP10.63□□□□□ -0.71
LINC00339-213ENST00000642137 NUP37Q8NFH4 326 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 OR52H1Q8NGJ2 320 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 PIK3IP1Q96FE7 263 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 PGAM5Q96HS1 289 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 OR5M11Q96RB7 305 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 TMEM204Q9BSN7 226 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 PBOV1Q9GZY1 135 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 OR10A2Q9H208 303 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 MOB1AQ9H8S9 216 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 TRIM36Q9NQ86 728 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 ACOXLQ9NUZ1 547 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 FRRS1LQ9P0K9 344 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 NUFIP1Q9UHK0 495 aaKnown RBP10.63□□□□□ -0.71
LINC00339-213ENST00000642137 OR52A1Q9UKL2 312 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 STARD10Q9Y365 291 aa10.63□□□□□ -0.71
LINC00339-213ENST00000642137 DOPEY1Q5JWR5 2465 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 A6NNC1 897 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 VSTM5A8MXK1 200 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 SHISA9B4DS77 424 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 E9PI62 339 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 SMPD2O60906 423 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 CD1AP06126 327 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 RPSAP08865 295 aaKnown RBP10.62□□□□□ -0.71
LINC00339-213ENST00000642137 SLC2A1P11166 492 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 COX6B1P14854 86 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 NKX6-1P78426 367 aaPredicted RBP10.62□□□□□ -0.71
LINC00339-213ENST00000642137 GPR50Q13585 617 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 MED22Q15528 200 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 UBE2UQ5VVX9 321 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 SLC22A25Q6T423 547 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 FAM57BQ71RH2 274 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 ZNF101Q8IZC7 436 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 OR1J1Q8NGS3 322 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 OR2G2Q8NGZ5 317 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 FCGR1BQ92637 280 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 ITFG2Q969R8 447 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 PPP1R14AQ96A00 147 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 SGK3Q96BR1 496 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 BRD7Q9NPI1 651 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 ZNF319Q9P2F9 582 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 ZNF391Q9UJN7 358 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 RNF115Q9Y4L5 304 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 N6AMT1Q9Y5N5 214 aa10.62□□□□□ -0.71
LINC00339-213ENST00000642137 TRBV2A0A0J9YWF9 115 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 A0A0U1RQV5 110 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 ATP6V1G2-DDX39BF2Z307 99 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 TBX1O43435 398 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 XRCC2O43543 280 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 PLPP2O43688 288 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 ATE1O95260 518 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 LALBAP00709 142 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 LCKP06239 509 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 FAM157BP0CG42 384 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 JUNBP17275 347 aaPredicted RBP10.61□□□□□ -0.71
LINC00339-213ENST00000642137 GTF2A1P52655 376 aaPredicted RBP10.61□□□□□ -0.71
LINC00339-213ENST00000642137 NANOS3P60323 173 aaKnown RBP10.61□□□□□ -0.71
LINC00339-213ENST00000642137 PPP1CBP62140 327 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 RPS23P62266 143 aaKnown RBP10.61□□□□□ -0.71
LINC00339-213ENST00000642137 MFGE8Q08431 387 aaPredicted RBP10.61□□□□□ -0.71
LINC00339-213ENST00000642137 SPOCK1Q08629 439 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 MALLQ13021 153 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 SNAI3Q3KNW1 292 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 WDR38Q5JTN6 314 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 ADAM5Q6NVV9 412 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 ZNF704Q6ZNC4 412 aaPredicted RBP10.61□□□□□ -0.71
LINC00339-213ENST00000642137 KCTD8Q6ZWB6 473 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 ZNF367Q7RTV3 350 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 PRSS35Q8N3Z0 413 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 OR8B12Q8NGG6 310 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 ABHD4Q8TB40 342 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 RPS4Y2Q8TD47 263 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 SPSB4Q96A44 273 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 MGLLQ99685 303 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 RGCCQ9H4X1 137 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 ST6GALNAC2Q9UJ37 374 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 SLC22A13Q9Y226 551 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 ATP23Q9Y6H3 246 aa10.61□□□□□ -0.71
LINC00339-213ENST00000642137 CADP27708 2225 aa10.6□□□□□ -0.71
LINC00339-213ENST00000642137 MYO18BQ8IUG5 2567 aa10.6□□□□□ -0.71
LINC00339-213ENST00000642137 OR4C45A6NMZ5 311 aa10.6□□□□□ -0.71
LINC00339-213ENST00000642137 H3BSA7 217 aa10.6□□□□□ -0.71
LINC00339-213ENST00000642137 PLAUP00749 431 aa10.6□□□□□ -0.71
LINC00339-213ENST00000642137 IGLV3-1P01715 115 aa10.6□□□□□ -0.71
LINC00339-213ENST00000642137 TTRP02766 147 aa10.6□□□□□ -0.71
LINC00339-213ENST00000642137 ISG15P05161 165 aa10.6□□□□□ -0.71
LINC00339-213ENST00000642137 CFL1P23528 166 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms