RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 ADA2Q9NZK5 511 aa14.09□□□□□ -0.15
SMN2-216ENST00000638794 TRAV40A0A0B4J280 105 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 OR6C68A6NDL8 312 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 GMNNO75496 209 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 GADD45GO95257 159 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 FSTL3O95633 263 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 PLATP00750 562 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 GGT2P36268 569 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 GATA4P43694 442 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 TRAP1Q12931 704 aaKnown RBP14.08□□□□□ -0.16
SMN2-216ENST00000638794 ECH1Q13011 328 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 MAB21L1Q13394 359 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 SLC9A3R2Q15599 337 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 PRR31Q5SQ13 230 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 C9orf139Q6ZV77 190 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 NLRC3Q7RTR2 1065 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 NAA40Q86UY6 237 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 SDR9C7Q8NEX9 313 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 OR8B3Q8NGG8 313 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 PLEKHA8Q96JA3 519 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 OR8B2Q96RD0 313 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 GORASP2Q9H8Y8 452 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 CYB5R1Q9UHQ9 305 aa14.08□□□□□ -0.16
SMN2-216ENST00000638794 CLDN34H7C241 214 aa14.07□□□□□ -0.16
SMN2-216ENST00000638794 OR10H3O60404 316 aa14.07□□□□□ -0.16
SMN2-216ENST00000638794 HLA-DQA2P01906 255 aa14.07□□□□□ -0.16
SMN2-216ENST00000638794 LCATP04180 440 aa14.07□□□□□ -0.16
SMN2-216ENST00000638794 NOS3P29474 1203 aa14.07□□□□□ -0.16
SMN2-216ENST00000638794 MTNR1AP48039 350 aa14.07□□□□□ -0.16
SMN2-216ENST00000638794 PITPNBP48739 271 aa14.07□□□□□ -0.16
SMN2-216ENST00000638794 SMIM11AP58511 58 aa14.07□□□□□ -0.16
SMN2-216ENST00000638794 SLC36A3Q495N2 470 aa14.07□□□□□ -0.16
SMN2-216ENST00000638794 OR2AJ1Q8NGZ0 328 aa14.07□□□□□ -0.16
SMN2-216ENST00000638794 TAF15Q92804 592 aaKnown RBP eCLIP14.07□□□□□ -0.16
SMN2-216ENST00000638794 PYURFQ96I23 114 aa14.07□□□□□ -0.16
SMN2-216ENST00000638794 CDADC1Q9BWV3 514 aa14.07□□□□□ -0.16
SMN2-216ENST00000638794 UNKLQ9H9P5 680 aaKnown RBP14.07□□□□□ -0.16
SMN2-216ENST00000638794 MRPL22Q9NWU5 206 aaKnown RBP14.07□□□□□ -0.16
SMN2-216ENST00000638794 CLN8Q9UBY8 286 aa14.07□□□□□ -0.16
SMN2-216ENST00000638794 CMYA5Q8N3K9 4069 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 KIR2DS1A0A191URI9 304 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 MDFIC2A0A1B0GVS7 189 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 IRF2P14316 349 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 PRDX6P30041 224 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 CD200P41217 278 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 RAD23AP54725 363 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 HOXA4Q00056 320 aaPredicted RBP14.06□□□□□ -0.16
SMN2-216ENST00000638794 MALLQ13021 153 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 CLEC12AQ5QGZ9 265 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 PRAMEF6Q5VXH4 476 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 LYPD2Q6UXB3 125 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 ZNF620Q6ZNG0 422 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 DCDC5Q6ZRR9 648 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 PGAP1Q75T13 922 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 FITM2Q8N6M3 262 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 CELF2-AS1Q8N7Q2 184 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 C19orf18Q8NEA5 215 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 Q8TCH9 128 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 SLCO4A1Q96BD0 722 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 MAP6Q96JE9 813 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 ELAC2Q9BQ52 826 aaKnown RBP14.06□□□□□ -0.16
SMN2-216ENST00000638794 NUDT16L1Q9BRJ7 211 aaKnown RBP14.06□□□□□ -0.16
SMN2-216ENST00000638794 ZNF696Q9H7X3 374 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 UFSP2Q9NUQ7 469 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 MAGEL2Q9UJ55 1249 aa14.06□□□□□ -0.16
SMN2-216ENST00000638794 M0R135 149 aa14.05□□□□□ -0.16
SMN2-216ENST00000638794 PHYHO14832 338 aa14.05□□□□□ -0.16
SMN2-216ENST00000638794 FAM20BO75063 409 aa14.05□□□□□ -0.16
SMN2-216ENST00000638794 RRM2P31350 389 aa14.05□□□□□ -0.16
SMN2-216ENST00000638794 MSX2P35548 267 aaPredicted RBP14.05□□□□□ -0.16
SMN2-216ENST00000638794 GSSP48637 474 aa14.05□□□□□ -0.16
SMN2-216ENST00000638794 MPPED2Q15777 294 aa14.05□□□□□ -0.16
SMN2-216ENST00000638794 SLC35F1Q5T1Q4 408 aa14.05□□□□□ -0.16
SMN2-216ENST00000638794 WDR25Q64LD2 544 aaPredicted RBP14.05□□□□□ -0.16
SMN2-216ENST00000638794 OR11L1Q8NGX0 322 aa14.05□□□□□ -0.16
SMN2-216ENST00000638794 SPRYD4Q8WW59 207 aaPredicted RBP14.05□□□□□ -0.16
SMN2-216ENST00000638794 ERGIC1Q969X5 290 aa14.05□□□□□ -0.16
SMN2-216ENST00000638794 MCUR1Q96AQ8 359 aa14.05□□□□□ -0.16
SMN2-216ENST00000638794 ZNF799Q96GE5 643 aa14.05□□□□□ -0.16
SMN2-216ENST00000638794 MED4Q9NPJ6 270 aa14.05□□□□□ -0.16
SMN2-216ENST00000638794 C22orf46C9J442 243 aa14.04□□□□□ -0.16
SMN2-216ENST00000638794 IDH3BO43837 385 aa14.04□□□□□ -0.16
SMN2-216ENST00000638794 FABP3P05413 133 aa14.04□□□□□ -0.16
SMN2-216ENST00000638794 HSD17B1P14061 328 aa14.04□□□□□ -0.16
SMN2-216ENST00000638794 CA6P23280 308 aa14.04□□□□□ -0.16
SMN2-216ENST00000638794 ANOS1P23352 680 aa14.04□□□□□ -0.16
SMN2-216ENST00000638794 IFNGR2P38484 337 aa14.04□□□□□ -0.16
SMN2-216ENST00000638794 RPS27P42677 84 aaKnown RBP14.04□□□□□ -0.16
SMN2-216ENST00000638794 TPTEP56180 551 aa14.04□□□□□ -0.16
SMN2-216ENST00000638794 IL13RA1P78552 427 aa14.04□□□□□ -0.16
SMN2-216ENST00000638794 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.04□□□□□ -0.16
SMN2-216ENST00000638794 TSPAN31Q12999 210 aa14.04□□□□□ -0.16
SMN2-216ENST00000638794 SNAI3Q3KNW1 292 aa14.04□□□□□ -0.16
SMN2-216ENST00000638794 PGBD2Q6P3X8 592 aa14.04□□□□□ -0.16
SMN2-216ENST00000638794 BRD3OSQ6XYD6 125 aa14.04□□□□□ -0.16
SMN2-216ENST00000638794 ZNF841Q6ZN19 808 aa14.04□□□□□ -0.16
SMN2-216ENST00000638794 MRPL21Q7Z2W9 205 aaKnown RBP14.04□□□□□ -0.16
SMN2-216ENST00000638794 OR10S1Q8NGN2 331 aa14.04□□□□□ -0.16
SMN2-216ENST00000638794 NSMCE2Q96MF7 247 aa14.04□□□□□ -0.16
SMN2-216ENST00000638794 EGLN3Q9H6Z9 239 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms