RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 ALDH3A2P51648 485 aa18.52■□□□□ 0.56
SCN1B-206ENST00000638536 CLEC9AQ6UXN8 241 aa18.52■□□□□ 0.56
SCN1B-206ENST00000638536 SPTSSAQ969W0 71 aa18.52■□□□□ 0.56
SCN1B-206ENST00000638536 KCNJ15Q99712 375 aa18.52■□□□□ 0.56
SCN1B-206ENST00000638536 CACNG2Q9Y698 323 aa18.52■□□□□ 0.56
SCN1B-206ENST00000638536 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.52■□□□□ 0.56
SCN1B-206ENST00000638536 TANC2Q9HCD6 1990 aa18.52■□□□□ 0.56
SCN1B-206ENST00000638536 E9PQ18 207 aa18.52■□□□□ 0.55
SCN1B-206ENST00000638536 CDC14BO60729 498 aa18.52■□□□□ 0.55
SCN1B-206ENST00000638536 BAG2O95816 211 aa18.52■□□□□ 0.55
SCN1B-206ENST00000638536 RAC2P15153 192 aa18.52■□□□□ 0.55
SCN1B-206ENST00000638536 SLC25A16P16260 332 aa18.52■□□□□ 0.55
SCN1B-206ENST00000638536 TUBG1P23258 451 aa18.52■□□□□ 0.55
SCN1B-206ENST00000638536 NR4A2P43354 598 aa18.52■□□□□ 0.55
SCN1B-206ENST00000638536 RIN1Q13671 783 aa18.52■□□□□ 0.55
SCN1B-206ENST00000638536 GK2Q14410 553 aaPredicted RBP18.52■□□□□ 0.55
SCN1B-206ENST00000638536 MOGQ16653 247 aa18.52■□□□□ 0.55
SCN1B-206ENST00000638536 SHFQ7M4L6 423 aa18.52■□□□□ 0.55
SCN1B-206ENST00000638536 OR5L1Q8NGL2 311 aa18.52■□□□□ 0.55
SCN1B-206ENST00000638536 OR2AE1Q8NHA4 323 aa18.52■□□□□ 0.55
SCN1B-206ENST00000638536 THEM6Q8WUY1 208 aa18.52■□□□□ 0.55
SCN1B-206ENST00000638536 COG8Q96MW5 612 aa18.52■□□□□ 0.55
SCN1B-206ENST00000638536 TUBG2Q9NRH3 451 aa18.52■□□□□ 0.55
SCN1B-206ENST00000638536 ENOPH1Q9UHY7 261 aa18.52■□□□□ 0.55
SCN1B-206ENST00000638536 N6AMT1Q9Y5N5 214 aa18.52■□□□□ 0.55
SCN1B-206ENST00000638536 IGHV4-61A0A0C4DH41 118 aa18.51■□□□□ 0.55
SCN1B-206ENST00000638536 PLSCR5A0PG75 271 aa18.51■□□□□ 0.55
SCN1B-206ENST00000638536 PRR32B1ATL7 298 aa18.51■□□□□ 0.55
SCN1B-206ENST00000638536 OPRL1P41146 370 aa18.51■□□□□ 0.55
SCN1B-206ENST00000638536 TAF13Q15543 124 aa18.51■□□□□ 0.55
SCN1B-206ENST00000638536 TRIP10Q15642 601 aa18.51■□□□□ 0.55
SCN1B-206ENST00000638536 MEPCEQ7L2J0 689 aaKnown RBP18.51■□□□□ 0.55
SCN1B-206ENST00000638536 PIMREGQ9BSJ6 248 aa18.51■□□□□ 0.55
SCN1B-206ENST00000638536 MYOZ1Q9NP98 299 aaPredicted RBP18.51■□□□□ 0.55
SCN1B-206ENST00000638536 NKIRAS2Q9NYR9 191 aa18.51■□□□□ 0.55
SCN1B-206ENST00000638536 TREM2Q9NZC2 230 aa18.51■□□□□ 0.55
SCN1B-206ENST00000638536 DNAJC27Q9NZQ0 273 aa18.51■□□□□ 0.55
SCN1B-206ENST00000638536 COPS3Q9UNS2 423 aa18.51■□□□□ 0.55
SCN1B-206ENST00000638536 NDUFS8O00217 210 aa18.5■□□□□ 0.55
SCN1B-206ENST00000638536 RP2O75695 350 aa18.5■□□□□ 0.55
SCN1B-206ENST00000638536 LYNP07948 512 aa18.5■□□□□ 0.55
SCN1B-206ENST00000638536 ALOX5APP20292 161 aa18.5■□□□□ 0.55
SCN1B-206ENST00000638536 GIFP27352 417 aa18.5■□□□□ 0.55
SCN1B-206ENST00000638536 ZNF92Q03936 586 aa18.5■□□□□ 0.55
SCN1B-206ENST00000638536 GGTLC2Q14390 218 aa18.5■□□□□ 0.55
SCN1B-206ENST00000638536 NXNL2Q5VZ03 156 aa18.5■□□□□ 0.55
SCN1B-206ENST00000638536 RFLNBQ8N5W9 214 aa18.5■□□□□ 0.55
SCN1B-206ENST00000638536 BHLHE23Q8NDY6 225 aa18.5■□□□□ 0.55
SCN1B-206ENST00000638536 RDH5Q92781 318 aa18.5■□□□□ 0.55
SCN1B-206ENST00000638536 MBOAT4Q96T53 435 aa18.5■□□□□ 0.55
SCN1B-206ENST00000638536 PRRG3Q9BZD7 231 aa18.5■□□□□ 0.55
SCN1B-206ENST00000638536 ZNF275Q9NSD4 429 aaPredicted RBP18.5■□□□□ 0.55
SCN1B-206ENST00000638536 GABPB1Q06547 395 aaPredicted RBP18.49■□□□□ 0.55
SCN1B-206ENST00000638536 LOXL1Q08397 574 aaPredicted RBP18.49■□□□□ 0.55
SCN1B-206ENST00000638536 CDK5R2Q13319 367 aa18.49■□□□□ 0.55
SCN1B-206ENST00000638536 PCGF3Q3KNV8 242 aa18.49■□□□□ 0.55
SCN1B-206ENST00000638536 GLYATL3Q5SZD4 288 aa18.49■□□□□ 0.55
SCN1B-206ENST00000638536 DRAM2Q6UX65 266 aa18.49■□□□□ 0.55
SCN1B-206ENST00000638536 USP51Q70EK9 711 aa18.49■□□□□ 0.55
SCN1B-206ENST00000638536 SLC16A9Q7RTY1 509 aa18.49■□□□□ 0.55
SCN1B-206ENST00000638536 PRSS45Q7RTY3 260 aa18.49■□□□□ 0.55
SCN1B-206ENST00000638536 ZNF283Q8N7M2 679 aa18.49■□□□□ 0.55
SCN1B-206ENST00000638536 TTTY10Q9BZA0 68 aa18.49■□□□□ 0.55
SCN1B-206ENST00000638536 ZNF319Q9P2F9 582 aa18.49■□□□□ 0.55
SCN1B-206ENST00000638536 PSMD9O00233 223 aa18.49■□□□□ 0.55
SCN1B-206ENST00000638536 MT-ND5P03915 603 aa18.49■□□□□ 0.55
SCN1B-206ENST00000638536 CX3CR1P49238 355 aa18.49■□□□□ 0.55
SCN1B-206ENST00000638536 LRRN1Q6UXK5 716 aa18.49■□□□□ 0.55
SCN1B-206ENST00000638536 STMN2Q93045 179 aa18.49■□□□□ 0.55
SCN1B-206ENST00000638536 C9orf16Q9BUW7 83 aa18.49■□□□□ 0.55
SCN1B-206ENST00000638536 TOR3AQ9H497 397 aa18.49■□□□□ 0.55
SCN1B-206ENST00000638536 DECR2Q9NUI1 292 aa18.49■□□□□ 0.55
SCN1B-206ENST00000638536 AASSQ9UDR5 926 aa18.49■□□□□ 0.55
SCN1B-206ENST00000638536 LRP5LA4QPB2 252 aa18.48■□□□□ 0.55
SCN1B-206ENST00000638536 H0YL77 283 aa18.48■□□□□ 0.55
SCN1B-206ENST00000638536 WNT9BO14905 357 aa18.48■□□□□ 0.55
SCN1B-206ENST00000638536 TPD52L2O43399 206 aaKnown RBP18.48■□□□□ 0.55
SCN1B-206ENST00000638536 ADH4P08319 380 aa18.48■□□□□ 0.55
SCN1B-206ENST00000638536 USF1P22415 310 aaPredicted RBP18.48■□□□□ 0.55
SCN1B-206ENST00000638536 LIPAP38571 399 aa18.48■□□□□ 0.55
SCN1B-206ENST00000638536 GRB2P62993 217 aaKnown RBP18.48■□□□□ 0.55
SCN1B-206ENST00000638536 ZBTB49Q6ZSB9 765 aa18.48■□□□□ 0.55
SCN1B-206ENST00000638536 ZNF454Q8N9F8 522 aa18.48■□□□□ 0.55
SCN1B-206ENST00000638536 OR2Z1Q8NG97 314 aa18.48■□□□□ 0.55
SCN1B-206ENST00000638536 HRASLS5Q96KN8 279 aa18.48■□□□□ 0.55
SCN1B-206ENST00000638536 CHODLQ9H9P2 273 aa18.48■□□□□ 0.55
SCN1B-206ENST00000638536 SAP30LQ9HAJ7 183 aa18.48■□□□□ 0.55
SCN1B-206ENST00000638536 ADGRL4Q9HBW9 690 aa18.48■□□□□ 0.55
SCN1B-206ENST00000638536 BRD7Q9NPI1 651 aa18.48■□□□□ 0.55
SCN1B-206ENST00000638536 CYSLTR2Q9NS75 346 aa18.48■□□□□ 0.55
SCN1B-206ENST00000638536 DCAF16Q9NXF7 216 aa18.48■□□□□ 0.55
SCN1B-206ENST00000638536 IQCF6A8MYZ5 107 aa18.47■□□□□ 0.55
SCN1B-206ENST00000638536 HEXAP06865 529 aa18.47■□□□□ 0.55
SCN1B-206ENST00000638536 H2BFMP0C1H6 154 aa18.47■□□□□ 0.55
SCN1B-206ENST00000638536 ACHEP22303 614 aa18.47■□□□□ 0.55
SCN1B-206ENST00000638536 HSD11B1P28845 292 aa18.47■□□□□ 0.55
SCN1B-206ENST00000638536 CRYBB2P43320 205 aa18.47■□□□□ 0.55
SCN1B-206ENST00000638536 SLC15A1P46059 708 aa18.47■□□□□ 0.55
SCN1B-206ENST00000638536 ZNF121P58317 390 aaPredicted RBP18.47■□□□□ 0.55
SCN1B-206ENST00000638536 TMEM249Q2WGJ8 235 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms