RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 MED30Q96HR3 178 aa19.01■□□□□ 0.63
CLN6-224ENST00000638076 STRADBQ9C0K7 418 aa19.01■□□□□ 0.63
CLN6-224ENST00000638076 METTL17Q9H7H0 456 aaPredicted RBP19.01■□□□□ 0.63
CLN6-224ENST00000638076 NPTNQ9Y639 398 aa19.01■□□□□ 0.63
CLN6-224ENST00000638076 A0A0A6YYH2 397 aa19.01■□□□□ 0.63
CLN6-224ENST00000638076 LNP1A1A4G5 178 aa19.01■□□□□ 0.63
CLN6-224ENST00000638076 A6NJ64 397 aa19.01■□□□□ 0.63
CLN6-224ENST00000638076 SP9P0CG40 484 aa19.01■□□□□ 0.63
CLN6-224ENST00000638076 ZNF20P17024 532 aa19.01■□□□□ 0.63
CLN6-224ENST00000638076 ENPP1P22413 925 aa19.01■□□□□ 0.63
CLN6-224ENST00000638076 CAPZA1P52907 286 aa19.01■□□□□ 0.63
CLN6-224ENST00000638076 GALK2Q01415 458 aa19.01■□□□□ 0.63
CLN6-224ENST00000638076 SSPNQ14714 243 aa19.01■□□□□ 0.63
CLN6-224ENST00000638076 POU4F3Q15319 338 aa19.01■□□□□ 0.63
CLN6-224ENST00000638076 SLC22A24Q8N4F4 322 aa19.01■□□□□ 0.63
CLN6-224ENST00000638076 ACBD4Q8NC06 268 aa19.01■□□□□ 0.63
CLN6-224ENST00000638076 TMEM54Q969K7 222 aa19.01■□□□□ 0.63
CLN6-224ENST00000638076 PTTG3PQ9NZH4 202 aa19.01■□□□□ 0.63
CLN6-224ENST00000638076 SCP2D1Q9UJQ7 156 aa19.01■□□□□ 0.63
CLN6-224ENST00000638076 ELF5Q9UKW6 265 aaPredicted RBP19.01■□□□□ 0.63
CLN6-224ENST00000638076 M0R296 226 aa19■□□□□ 0.63
CLN6-224ENST00000638076 C10orf128Q5T292 105 aa19■□□□□ 0.63
CLN6-224ENST00000638076 STEAP1BQ6NZ63 245 aa19■□□□□ 0.63
CLN6-224ENST00000638076 ZNF529Q6P280 563 aa19■□□□□ 0.63
CLN6-224ENST00000638076 MEIOBQ8N635 442 aa19■□□□□ 0.63
CLN6-224ENST00000638076 ZNF283Q8N7M2 679 aa19■□□□□ 0.63
CLN6-224ENST00000638076 GPN1Q9HCN4 374 aaPredicted RBP19■□□□□ 0.63
CLN6-224ENST00000638076 GPR84Q9NQS5 396 aa19■□□□□ 0.63
CLN6-224ENST00000638076 FARSAQ9Y285 508 aaKnown RBP19■□□□□ 0.63
CLN6-224ENST00000638076 CREBL2O60519 120 aaPredicted RBP19■□□□□ 0.63
CLN6-224ENST00000638076 HPP00738 406 aa19■□□□□ 0.63
CLN6-224ENST00000638076 IL5P05113 134 aa19■□□□□ 0.63
CLN6-224ENST00000638076 ABOP16442 354 aa19■□□□□ 0.63
CLN6-224ENST00000638076 RAB6AP20340 208 aa19■□□□□ 0.63
CLN6-224ENST00000638076 MSR1P21757 451 aa19■□□□□ 0.63
CLN6-224ENST00000638076 LSM6P62312 80 aaKnown RBP19■□□□□ 0.63
CLN6-224ENST00000638076 ZNF626Q68DY1 528 aa19■□□□□ 0.63
CLN6-224ENST00000638076 NLRC3Q7RTR2 1065 aa19■□□□□ 0.63
CLN6-224ENST00000638076 YRDCQ86U90 279 aaKnown RBP19■□□□□ 0.63
CLN6-224ENST00000638076 GABRG1Q8N1C3 465 aa19■□□□□ 0.63
CLN6-224ENST00000638076 TAAR9Q96RI9 348 aa19■□□□□ 0.63
CLN6-224ENST00000638076 SLX1AQ9BQ83 275 aa19■□□□□ 0.63
CLN6-224ENST00000638076 UQCC2Q9BRT2 126 aa19■□□□□ 0.63
CLN6-224ENST00000638076 ZPBPQ9BS86 351 aa19■□□□□ 0.63
CLN6-224ENST00000638076 SRXN1Q9BYN0 137 aa19■□□□□ 0.63
CLN6-224ENST00000638076 NELFAQ9H3P2 528 aa19■□□□□ 0.63
CLN6-224ENST00000638076 RAB22AQ9UL26 194 aa19■□□□□ 0.63
CLN6-224ENST00000638076 TNFRSF10AO00220 468 aa18.99■□□□□ 0.63
CLN6-224ENST00000638076 JMJD7P0C870 316 aa18.99■□□□□ 0.63
CLN6-224ENST00000638076 DNASE1P24855 282 aa18.99■□□□□ 0.63
CLN6-224ENST00000638076 GRB2P62993 217 aaKnown RBP18.99■□□□□ 0.63
CLN6-224ENST00000638076 FAM57BQ71RH2 274 aa18.99■□□□□ 0.63
CLN6-224ENST00000638076 TMEM123Q8N131 208 aa18.99■□□□□ 0.63
CLN6-224ENST00000638076 PAQR4Q8N4S7 273 aaPredicted RBP18.99■□□□□ 0.63
CLN6-224ENST00000638076 ESX1Q8N693 406 aa18.99■□□□□ 0.63
CLN6-224ENST00000638076 FAM71F1Q96KD3 344 aaPredicted RBP18.99■□□□□ 0.63
CLN6-224ENST00000638076 SCPEP1Q9HB40 452 aa18.99■□□□□ 0.63
CLN6-224ENST00000638076 METTL21EPA6NDL7 271 aa18.99■□□□□ 0.63
CLN6-224ENST00000638076 TSC22D2O75157 780 aa18.99■□□□□ 0.63
CLN6-224ENST00000638076 CPN1P15169 458 aa18.99■□□□□ 0.63
CLN6-224ENST00000638076 SRD5A2P31213 254 aa18.99■□□□□ 0.63
CLN6-224ENST00000638076 TAS2R19P59542 299 aa18.99■□□□□ 0.63
CLN6-224ENST00000638076 UNC119Q13432 240 aa18.99■□□□□ 0.63
CLN6-224ENST00000638076 CSRP2Q16527 193 aa18.99■□□□□ 0.63
CLN6-224ENST00000638076 GFOD2Q3B7J2 385 aa18.99■□□□□ 0.63
CLN6-224ENST00000638076 CCDC92Q53HC0 331 aaPredicted RBP18.99■□□□□ 0.63
CLN6-224ENST00000638076 ACER2Q5QJU3 275 aa18.99■□□□□ 0.63
CLN6-224ENST00000638076 OR2T35Q8NGX2 323 aa18.99■□□□□ 0.63
CLN6-224ENST00000638076 FAM46BQ96A09 425 aa18.99■□□□□ 0.63
CLN6-224ENST00000638076 MGAT4CQ9UBM8 478 aa18.99■□□□□ 0.63
CLN6-224ENST00000638076 TMEM235A6NFC5 223 aa18.98■□□□□ 0.63
CLN6-224ENST00000638076 GJE1A6NN92 205 aa18.98■□□□□ 0.63
CLN6-224ENST00000638076 RLN1P04808 185 aa18.98■□□□□ 0.63
CLN6-224ENST00000638076 VSIG10L2P0DP72 767 aa18.98■□□□□ 0.63
CLN6-224ENST00000638076 B3GALT5-AS1P59052 145 aa18.98■□□□□ 0.63
CLN6-224ENST00000638076 ZIC4Q8N9L1 334 aa18.98■□□□□ 0.63
CLN6-224ENST00000638076 OR52B4Q8NGK2 314 aa18.98■□□□□ 0.63
CLN6-224ENST00000638076 OR14L1PQ8NHC6 308 aa18.98■□□□□ 0.63
CLN6-224ENST00000638076 SLC39A7Q92504 469 aa18.98■□□□□ 0.63
CLN6-224ENST00000638076 RBM24Q9BX46 236 aaKnown RBP18.98■□□□□ 0.63
CLN6-224ENST00000638076 P4HTMQ9NXG6 502 aa18.98■□□□□ 0.63
CLN6-224ENST00000638076 SNRPGP15A8MWD9 76 aa18.97■□□□□ 0.63
CLN6-224ENST00000638076 ZNF93P35789 620 aaPredicted RBP18.97■□□□□ 0.63
CLN6-224ENST00000638076 LRRC18Q8N456 261 aa18.97■□□□□ 0.63
CLN6-224ENST00000638076 TMEM229BQ8NBD8 167 aa18.97■□□□□ 0.63
CLN6-224ENST00000638076 SPACA5Q96QH8 159 aa18.97■□□□□ 0.63
CLN6-224ENST00000638076 SLC23A1Q9UHI7 598 aa18.97■□□□□ 0.63
CLN6-224ENST00000638076 SLC5A6Q9Y289 635 aa18.97■□□□□ 0.63
CLN6-224ENST00000638076 BPNT1O95861 308 aa18.97■□□□□ 0.63
CLN6-224ENST00000638076 ERCC1P07992 297 aaPredicted RBP18.97■□□□□ 0.63
CLN6-224ENST00000638076 RFPL3SP0C7P2 107 aa18.97■□□□□ 0.63
CLN6-224ENST00000638076 VSIG8P0DPA2 414 aa18.97■□□□□ 0.63
CLN6-224ENST00000638076 ZNF133P52736 654 aaPredicted RBP18.97■□□□□ 0.63
CLN6-224ENST00000638076 QRFPP83859 136 aa18.97■□□□□ 0.63
CLN6-224ENST00000638076 ENDOGQ14249 297 aaKnown RBP18.97■□□□□ 0.63
CLN6-224ENST00000638076 AWAT2Q6E213 333 aa18.97■□□□□ 0.63
CLN6-224ENST00000638076 H3F3CQ6NXT2 135 aa18.97■□□□□ 0.63
CLN6-224ENST00000638076 SLC36A1Q7Z2H8 476 aa18.97■□□□□ 0.63
CLN6-224ENST00000638076 SPICQ8N5J4 248 aa18.97■□□□□ 0.63
CLN6-224ENST00000638076 GJC3Q8NFK1 279 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms