RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 GNB2P62879 340 aa15.43■□□□□ 0.06
CLN6-220ENST00000637450 MAB21L1Q13394 359 aa15.43■□□□□ 0.06
CLN6-220ENST00000637450 FAM201AQ5SY85 155 aa15.43■□□□□ 0.06
CLN6-220ENST00000637450 NAA40Q86UY6 237 aa15.43■□□□□ 0.06
CLN6-220ENST00000637450 PARP8Q8N3A8 854 aa15.43■□□□□ 0.06
CLN6-220ENST00000637450 CELF2-AS1Q8N7Q2 184 aa15.43■□□□□ 0.06
CLN6-220ENST00000637450 OR2AJ1Q8NGZ0 328 aa15.43■□□□□ 0.06
CLN6-220ENST00000637450 UPRTQ96BW1 309 aa15.43■□□□□ 0.06
CLN6-220ENST00000637450 PLEKHA8Q96JA3 519 aa15.43■□□□□ 0.06
CLN6-220ENST00000637450 PITX2Q99697 317 aa15.43■□□□□ 0.06
CLN6-220ENST00000637450 ATF6BQ99941 703 aa15.43■□□□□ 0.06
CLN6-220ENST00000637450 ELAC2Q9BQ52 826 aaKnown RBP15.43■□□□□ 0.06
CLN6-220ENST00000637450 PNRC2Q9NPJ4 139 aaKnown RBP15.43■□□□□ 0.06
CLN6-220ENST00000637450 IGHV3OR16-10A0A075B7F0 116 aa15.42■□□□□ 0.06
CLN6-220ENST00000637450 KIR2DS1A0A191URI9 304 aa15.42■□□□□ 0.06
CLN6-220ENST00000637450 OR6C68A6NDL8 312 aa15.42■□□□□ 0.06
CLN6-220ENST00000637450 TMPRSS2O15393 492 aa15.42■□□□□ 0.06
CLN6-220ENST00000637450 IDH3BO43837 385 aa15.42■□□□□ 0.06
CLN6-220ENST00000637450 OR10H3O60404 316 aa15.42■□□□□ 0.06
CLN6-220ENST00000637450 PLATP00750 562 aa15.42■□□□□ 0.06
CLN6-220ENST00000637450 NOS3P29474 1203 aa15.42■□□□□ 0.06
CLN6-220ENST00000637450 GGT2P36268 569 aa15.42■□□□□ 0.06
CLN6-220ENST00000637450 MTNR1AP48039 350 aa15.42■□□□□ 0.06
CLN6-220ENST00000637450 PRSS12P56730 875 aa15.42■□□□□ 0.06
CLN6-220ENST00000637450 SPIBQ01892 262 aa15.42■□□□□ 0.06
CLN6-220ENST00000637450 TRAP1Q12931 704 aaKnown RBP15.42■□□□□ 0.06
CLN6-220ENST00000637450 SLC9A3R2Q15599 337 aa15.42■□□□□ 0.06
CLN6-220ENST00000637450 PRR31Q5SQ13 230 aa15.42■□□□□ 0.06
CLN6-220ENST00000637450 Q8TCH9 128 aa15.42■□□□□ 0.06
CLN6-220ENST00000637450 ERGIC1Q969X5 290 aa15.42■□□□□ 0.06
CLN6-220ENST00000637450 SLC25A28Q96A46 364 aa15.42■□□□□ 0.06
CLN6-220ENST00000637450 SLCO4A1Q96BD0 722 aa15.42■□□□□ 0.06
CLN6-220ENST00000637450 MED4Q9NPJ6 270 aa15.42■□□□□ 0.06
CLN6-220ENST00000637450 SOX21Q9Y651 276 aaPredicted RBP15.42■□□□□ 0.06
CLN6-220ENST00000637450 V9GYQ6 96 aa15.42■□□□□ 0.06
CLN6-220ENST00000637450 LCATP04180 440 aa15.41■□□□□ 0.06
CLN6-220ENST00000637450 CD200P41217 278 aa15.41■□□□□ 0.06
CLN6-220ENST00000637450 GSSP48637 474 aa15.41■□□□□ 0.06
CLN6-220ENST00000637450 PITPNBP48739 271 aa15.41■□□□□ 0.06
CLN6-220ENST00000637450 MALLQ13021 153 aa15.41■□□□□ 0.06
CLN6-220ENST00000637450 NLRC3Q7RTR2 1065 aa15.41■□□□□ 0.06
CLN6-220ENST00000637450 OR8B3Q8NGG8 313 aa15.41■□□□□ 0.06
CLN6-220ENST00000637450 OR8B2Q96RD0 313 aa15.41■□□□□ 0.06
CLN6-220ENST00000637450 ZNF696Q9H7X3 374 aa15.41■□□□□ 0.06
CLN6-220ENST00000637450 MRPL22Q9NWU5 206 aaKnown RBP15.41■□□□□ 0.06
CLN6-220ENST00000637450 HLA-DQA2P01906 255 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 HSD17B1P14061 328 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 IRF2P14316 349 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 IFNGR2P38484 337 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 RAD23AP54725 363 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 TPTEP56180 551 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 CLEC12AQ5QGZ9 265 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 LYPD2Q6UXB3 125 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 ZNF841Q6ZN19 808 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 DCDC5Q6ZRR9 648 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 PGAP1Q75T13 922 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 SDR9C7Q8NEX9 313 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 GNPDA2Q8TDQ7 276 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 MCUR1Q96AQ8 359 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 MAP6Q96JE9 813 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 NUDT16L1Q9BRJ7 211 aaKnown RBP15.4■□□□□ 0.06
CLN6-220ENST00000637450 FN3KQ9H479 309 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 CLN8Q9UBY8 286 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 CD300AQ9UGN4 299 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 MAGEL2Q9UJ55 1249 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 KCNG2Q9UJ96 466 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 TMCC3Q9ULS5 477 aa15.4■□□□□ 0.06
CLN6-220ENST00000637450 FAM20BO75063 409 aa15.39■□□□□ 0.05
CLN6-220ENST00000637450 FABP3P05413 133 aa15.39■□□□□ 0.05
CLN6-220ENST00000637450 RRM2P31350 389 aa15.39■□□□□ 0.05
CLN6-220ENST00000637450 IL13RA1P78552 427 aa15.39■□□□□ 0.05
CLN6-220ENST00000637450 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.39■□□□□ 0.05
CLN6-220ENST00000637450 TSPAN31Q12999 210 aa15.39■□□□□ 0.05
CLN6-220ENST00000637450 SLC35F1Q5T1Q4 408 aa15.39■□□□□ 0.05
CLN6-220ENST00000637450 WDR25Q64LD2 544 aaPredicted RBP15.39■□□□□ 0.05
CLN6-220ENST00000637450 ZNF620Q6ZNG0 422 aa15.39■□□□□ 0.05
CLN6-220ENST00000637450 FITM2Q8N6M3 262 aa15.39■□□□□ 0.05
CLN6-220ENST00000637450 OR10S1Q8NGN2 331 aa15.39■□□□□ 0.05
CLN6-220ENST00000637450 OR11L1Q8NGX0 322 aa15.39■□□□□ 0.05
CLN6-220ENST00000637450 SPRYD4Q8WW59 207 aaPredicted RBP15.39■□□□□ 0.05
CLN6-220ENST00000637450 DDOQ99489 341 aa15.39■□□□□ 0.05
CLN6-220ENST00000637450 UNKLQ9H9P5 680 aaKnown RBP15.39■□□□□ 0.05
CLN6-220ENST00000637450 IL1RAPQ9NPH3 570 aa15.39■□□□□ 0.05
CLN6-220ENST00000637450 TRAV40A0A0B4J280 105 aa15.38■□□□□ 0.05
CLN6-220ENST00000637450 POM121CA8CG34 1229 aa15.38■□□□□ 0.05
CLN6-220ENST00000637450 M0R135 149 aa15.38■□□□□ 0.05
CLN6-220ENST00000637450 PHYHO14832 338 aa15.38■□□□□ 0.05
CLN6-220ENST00000637450 MSX2P35548 267 aaPredicted RBP15.38■□□□□ 0.05
CLN6-220ENST00000637450 PSMB10P40306 273 aa15.38■□□□□ 0.05
CLN6-220ENST00000637450 MPPED2Q15777 294 aa15.38■□□□□ 0.05
CLN6-220ENST00000637450 PRAMEF6Q5VXH4 476 aa15.38■□□□□ 0.05
CLN6-220ENST00000637450 PGBD2Q6P3X8 592 aa15.38■□□□□ 0.05
CLN6-220ENST00000637450 C19orf18Q8NEA5 215 aa15.38■□□□□ 0.05
CLN6-220ENST00000637450 SPTSSAQ969W0 71 aa15.38■□□□□ 0.05
CLN6-220ENST00000637450 ZNF799Q96GE5 643 aa15.38■□□□□ 0.05
CLN6-220ENST00000637450 NSMCE2Q96MF7 247 aa15.38■□□□□ 0.05
CLN6-220ENST00000637450 SLC22A4Q9H015 551 aa15.38■□□□□ 0.05
CLN6-220ENST00000637450 PRDM13Q9H4Q3 707 aa15.38■□□□□ 0.05
CLN6-220ENST00000637450 UFSP2Q9NUQ7 469 aa15.38■□□□□ 0.05
CLN6-220ENST00000637450 CMYA5Q8N3K9 4069 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms