RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 IGKV3OR2-268A0A0C4DH90 116 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 M0R135 149 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 TRA2BP62995 288 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 AVPI1Q5T686 147 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 DPY19L2P2Q6ZN68 376 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 ZNF683Q8IZ20 524 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 ZNF799Q96GE5 643 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 LIPGQ9Y5X9 500 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 GYPAP02724 150 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 APEX1P27695 318 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 LYZP61626 148 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 NUP37Q8NFH4 326 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 AP5S1Q9NUS5 200 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 CCDC187A0A096LP49 1063 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 A1L4Q6 167 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 ZNF487B1APH4 448 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 ZNF133P52736 654 aaPredicted RBP16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 ZNF91Q05481 1191 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 TSPAN31Q12999 210 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 FRMPD2BQ6IN97 320 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 LRP11Q86VZ4 500 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 ASB16Q96NS5 453 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 NIPSNAP3BQ9BS92 247 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 CTDSP1Q9GZU7 261 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 HSD17B1P14061 328 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 CA6P23280 308 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 HTR4Q13639 388 aa16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 CBARPQ8N350 705 aaPredicted RBP16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 NAA50Q9GZZ1 169 aaKnown RBP16.19■□□□□ 0.18
CACNA1A-227ENST00000636549 ZNF701M0R085 212 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 ZNF195O14628 629 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 SLC35E2P0CK97 266 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 POLR2IP36954 125 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 KIAA0141Q14154 515 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 TRIP6Q15654 476 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 LHFPL2Q6ZUX7 228 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 SLC25A26Q70HW3 274 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 L3MBTL4Q8NA19 623 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 TAPBPO15533 448 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 TCTN1Q2MV58 587 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 ACTBL2Q562R1 376 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 OLIG1Q8TAK6 271 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 C20orf141Q9NUB4 165 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 ARHGAP33O14559 1287 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 C16orf47Q6ZP98 133 aaPredicted RBP16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 ADGRE4PQ86SQ3 457 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 CENPOQ9BU64 300 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 FAM53CQ9NYF3 392 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 PTBP3O95758 552 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 TCTE3Q8IZS6 198 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 SCPEP1Q9HB40 452 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 ARFGEF2Q9Y6D5 1785 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 LOC107986453A0A1B0GWG9 222 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 M0R1X1 148 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 SOD1P00441 154 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 HIST1H1CP16403 213 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 GUCA2BQ16661 112 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 ADAMTSL4Q6UY14 1074 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 OR1B1Q8NGR6 318 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 SLA2Q9H6Q3 261 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 APOBEC1P41238 236 aaKnown RBP16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 BPIFB3P59826 476 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 ZNF596Q8TC21 504 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 PPIL1Q9Y3C6 166 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 CHST2Q9Y4C5 530 aa16.18■□□□□ 0.18
CACNA1A-227ENST00000636549 CBY3A6NI87 242 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 ZNF17P17021 662 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 AKR1C3P42330 323 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 HAVCR2Q8TDQ0 301 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 MS4A8Q9BY19 250 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 SDR39U1Q9NRG7 319 aaPredicted RBP16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 FABP7O15540 132 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 DNAJB5O75953 348 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 ORM2P19652 201 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 ABCD3P28288 659 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 FCGR2CP31995 323 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 VEZF1Q14119 521 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 SOHLH1Q5JUK2 328 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 LACC1Q8IV20 430 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 MPLP40238 635 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 SOX8P57073 446 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 ZNF486Q96H40 463 aaPredicted RBP16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 GPR45Q9Y5Y3 372 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 DLG5Q8TDM6 1919 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 NTN1O95631 604 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 OR2T7P0C7T2 308 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 FABP4P15090 132 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 FECHP22830 423 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 EPHA2P29317 976 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 GRINAQ7Z429 371 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 TAAR9Q96RI9 348 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 RYDENQ9NUL5 291 aaKnown RBP16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 OR1A1Q9P1Q5 309 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 HS3ST3A1Q9Y663 406 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 URB1O60287 2271 aaKnown RBP16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 PMCHP20382 165 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 ZNF121P58317 390 aaPredicted RBP16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 Q499Y3 187 aa16.17■□□□□ 0.18
CACNA1A-227ENST00000636549 SLC35E4Q6ICL7 350 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms