RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 FLOT2Q14254 428 aa15.43■□□□□ 0.06
CLN6-210ENST00000635747 PCK2Q16822 640 aa15.43■□□□□ 0.06
CLN6-210ENST00000635747 TMEM155Q4W5P6 130 aa15.43■□□□□ 0.06
CLN6-210ENST00000635747 SPRNQ5BIV9 151 aa15.43■□□□□ 0.06
CLN6-210ENST00000635747 DRAM2Q6UX65 266 aa15.43■□□□□ 0.06
CLN6-210ENST00000635747 PGAP1Q75T13 922 aa15.43■□□□□ 0.06
CLN6-210ENST00000635747 OR4M2Q8NGB6 313 aa15.43■□□□□ 0.06
CLN6-210ENST00000635747 OR9Q1Q8NGQ5 310 aa15.43■□□□□ 0.06
CLN6-210ENST00000635747 OR4Q3Q8NH05 313 aa15.43■□□□□ 0.06
CLN6-210ENST00000635747 NIPSNAP1Q9BPW8 284 aa15.43■□□□□ 0.06
CLN6-210ENST00000635747 NMNAT2Q9BZQ4 307 aa15.43■□□□□ 0.06
CLN6-210ENST00000635747 ZNF556Q9HAH1 456 aa15.43■□□□□ 0.06
CLN6-210ENST00000635747 UBAP1Q9NZ09 502 aa15.43■□□□□ 0.06
CLN6-210ENST00000635747 COMMD3-BMI1R4GMX3 469 aa15.43■□□□□ 0.06
CLN6-210ENST00000635747 TVP23AA6NH52 213 aa15.42■□□□□ 0.06
CLN6-210ENST00000635747 H3BN98 237 aa15.42■□□□□ 0.06
CLN6-210ENST00000635747 TCF21O43680 179 aa15.42■□□□□ 0.06
CLN6-210ENST00000635747 SPI1P17947 270 aa15.42■□□□□ 0.06
CLN6-210ENST00000635747 PAICSP22234 425 aaKnown RBP15.42■□□□□ 0.06
CLN6-210ENST00000635747 CPT2P23786 658 aa15.42■□□□□ 0.06
CLN6-210ENST00000635747 GRK5P34947 590 aa15.42■□□□□ 0.06
CLN6-210ENST00000635747 SLC6A9P48067 706 aa15.42■□□□□ 0.06
CLN6-210ENST00000635747 GK2Q14410 553 aaPredicted RBP15.42■□□□□ 0.06
CLN6-210ENST00000635747 TAF13Q15543 124 aa15.42■□□□□ 0.06
CLN6-210ENST00000635747 DCXRQ7Z4W1 244 aa15.42■□□□□ 0.06
CLN6-210ENST00000635747 SPATA24Q86W54 205 aa15.42■□□□□ 0.06
CLN6-210ENST00000635747 LRRC28Q86X40 367 aaPredicted RBP15.42■□□□□ 0.06
CLN6-210ENST00000635747 OR51L1Q8NGJ5 315 aa15.42■□□□□ 0.06
CLN6-210ENST00000635747 SLC22A4Q9H015 551 aa15.42■□□□□ 0.06
CLN6-210ENST00000635747 WDR76Q9H967 626 aa15.42■□□□□ 0.06
CLN6-210ENST00000635747 GCM1Q9NP62 436 aa15.42■□□□□ 0.06
CLN6-210ENST00000635747 G6PC2Q9NQR9 355 aa15.42■□□□□ 0.06
CLN6-210ENST00000635747 A0A1B0GWJ7 208 aa15.41■□□□□ 0.06
CLN6-210ENST00000635747 ZNF593O00488 134 aaPredicted RBP15.41■□□□□ 0.06
CLN6-210ENST00000635747 E2F6O75461 281 aa15.41■□□□□ 0.06
CLN6-210ENST00000635747 FOXH1O75593 365 aa15.41■□□□□ 0.06
CLN6-210ENST00000635747 DNAJC8O75937 253 aaPredicted RBP15.41■□□□□ 0.06
CLN6-210ENST00000635747 SPARCP09486 303 aa15.41■□□□□ 0.06
CLN6-210ENST00000635747 OTX1P32242 354 aaPredicted RBP15.41■□□□□ 0.06
CLN6-210ENST00000635747 SLC15A1P46059 708 aa15.41■□□□□ 0.06
CLN6-210ENST00000635747 BTG1P62324 171 aa15.41■□□□□ 0.06
CLN6-210ENST00000635747 DCAF12L2Q5VW00 463 aa15.41■□□□□ 0.06
CLN6-210ENST00000635747 MRPL21Q7Z2W9 205 aaKnown RBP15.41■□□□□ 0.06
CLN6-210ENST00000635747 NAA40Q86UY6 237 aa15.41■□□□□ 0.06
CLN6-210ENST00000635747 PHC2Q8IXK0 858 aa15.41■□□□□ 0.06
CLN6-210ENST00000635747 MUC20Q8N307 709 aaPredicted RBP15.41■□□□□ 0.06
CLN6-210ENST00000635747 CELF2-AS1Q8N7Q2 184 aa15.41■□□□□ 0.06
CLN6-210ENST00000635747 BHLHE23Q8NDY6 225 aa15.41■□□□□ 0.06
CLN6-210ENST00000635747 OR10AD1Q8NGE0 317 aa15.41■□□□□ 0.06
CLN6-210ENST00000635747 OR6K6Q8NGW6 343 aa15.41■□□□□ 0.06
CLN6-210ENST00000635747 SPRYD4Q8WW59 207 aaPredicted RBP15.41■□□□□ 0.06
CLN6-210ENST00000635747 ZNRF4Q8WWF5 429 aa15.41■□□□□ 0.06
CLN6-210ENST00000635747 SLCO4A1Q96BD0 722 aa15.41■□□□□ 0.06
CLN6-210ENST00000635747 MEGF10Q96KG7 1140 aa15.41■□□□□ 0.06
CLN6-210ENST00000635747 KCNJ15Q99712 375 aa15.41■□□□□ 0.06
CLN6-210ENST00000635747 COPS4Q9BT78 406 aa15.41■□□□□ 0.06
CLN6-210ENST00000635747 OPA3Q9H6K4 179 aa15.41■□□□□ 0.06
CLN6-210ENST00000635747 PDP1Q9P0J1 537 aaPredicted RBP15.41■□□□□ 0.06
CLN6-210ENST00000635747 PPIAL4EA0A075B759 164 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 A0A0A6YYJ9 748 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 PPIAL4CA0A0B4J2A2 164 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 LRRC30A6NM36 301 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 ZNF878C9JN71 531 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 PPIAL4DF5H284 164 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 TMEM178BH3BS89 294 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 HMGN1P05114 100 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 GYPBP06028 91 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 PPIAL4FP0DN26 164 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 ANXA8P13928 327 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 MDH2P40926 338 aaKnown RBP15.4■□□□□ 0.06
CLN6-210ENST00000635747 RPS27P42677 84 aaKnown RBP15.4■□□□□ 0.06
CLN6-210ENST00000635747 RAD23AP54725 363 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 GABPB1Q06547 395 aaPredicted RBP15.4■□□□□ 0.06
CLN6-210ENST00000635747 ZNF181Q2M3W8 571 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 C1orf87Q8N0U7 546 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 ZNF511Q8NB15 262 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 OR10S1Q8NGN2 331 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 ERGIC1Q969X5 290 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 SLC7A6OSQ96CW6 309 aaPredicted RBP15.4■□□□□ 0.06
CLN6-210ENST00000635747 SLAMF6Q96DU3 332 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 TEX12Q9BXU0 123 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 METTL17Q9H7H0 456 aaPredicted RBP15.4■□□□□ 0.06
CLN6-210ENST00000635747 SP140LQ9H930 580 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 PATZ1Q9HBE1 687 aaKnown RBP15.4■□□□□ 0.06
CLN6-210ENST00000635747 CENPMQ9NSP4 180 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.4■□□□□ 0.06
CLN6-210ENST00000635747 DNAJB9Q9UBS3 223 aa15.4■□□□□ 0.06
CLN6-210ENST00000635747 STAB1Q9NY15 2570 aa15.39■□□□□ 0.05
CLN6-210ENST00000635747 TCRBV3S1A0A5B6 114 aa15.39■□□□□ 0.05
CLN6-210ENST00000635747 ATP5HO75947 161 aa15.39■□□□□ 0.05
CLN6-210ENST00000635747 FSTL3O95633 263 aa15.39■□□□□ 0.05
CLN6-210ENST00000635747 APOC1P02654 83 aa15.39■□□□□ 0.05
CLN6-210ENST00000635747 RASSF2P50749 326 aa15.39■□□□□ 0.05
CLN6-210ENST00000635747 GRB2P62993 217 aaKnown RBP15.39■□□□□ 0.05
CLN6-210ENST00000635747 LYPD4Q6UWN0 246 aa15.39■□□□□ 0.05
CLN6-210ENST00000635747 RHOUQ7L0Q8 258 aa15.39■□□□□ 0.05
CLN6-210ENST00000635747 SHFQ7M4L6 423 aa15.39■□□□□ 0.05
CLN6-210ENST00000635747 PAPD5Q8NDF8 572 aaKnown RBP15.39■□□□□ 0.05
CLN6-210ENST00000635747 SIGLEC11Q96RL6 698 aa15.39■□□□□ 0.05
CLN6-210ENST00000635747 TOR3AQ9H497 397 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms