RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-240	ENST00000635392	PRAMEF20	Q5VT98	475 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	IL34	Q6ZMJ4	242 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	RFLNA	Q6ZTI6	216 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	ASCL5	Q7RTU5	278 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	LINC00523	Q86TU6	105 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	SLC26A11	Q86WA9	606 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	SLC13A5	Q86YT5	568 aa	Predicted RBP	4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	C14orf178	Q8N769	122 aa	Predicted RBP	4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	ACTL9	Q8TC94	416 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	PDCD6IP	Q8WUM4	868 aa	Known RBP	4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	IMP4	Q96G21	291 aa	Known RBP	4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	C16orf74	Q96GX8	76 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	MS4A4E	Q96PG1	132 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	TECTB	Q96PL2	329 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	QKI	Q96PU8	341 aa	Known RBP eCLIP	4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	LYSMD1	Q96S90	227 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	EBF4	Q9BQW3	602 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	NICN1	Q9BSH3	213 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	ACTR6	Q9GZN1	396 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	OR51J1	Q9H342	316 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	RNF167	Q9H6Y7	350 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	SH2D2A	Q9NP31	389 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	GIN1	Q9NXP7	522 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	TREM2	Q9NZC2	230 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	HYOU1	Q9Y4L1	999 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	PLXND1	Q9Y4D7	1925 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	WDFY4	Q6ZS81	3184 aa		4.28	□□□□□ -1.72
SMARCA2-240	ENST00000635392	ABCA7	Q8IZY2	2146 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	CACNA1E	Q15878	2313 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392		A0A0G2JLM5	398 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392		A0A0J9YYE9	177 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	C10orf142	B7Z368	130 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	KCNK1	O00180	336 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PGRMC1	O00264	195 aa	Known RBP	4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	SLC31A1	O15431	190 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ZW10	O43264	779 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TRBC1	P01850	177 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	FGF1	P05230	155 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	IGHV4-34	P06331	123 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	KLK3	P07288	261 aa	Predicted RBP	4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TBP	P20226	339 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	CSRP1	P21291	193 aa	Known RBP	4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	XKR7	Q5GH72	579 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	LRRC66	Q68CR7	880 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PDPK2P	Q6A1A2	396 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TIGD3	Q6B0B8	471 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ZBED8	Q8IZ13	594 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	OR51S1	Q8NGJ8	323 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	OR6K2	Q8NGY2	324 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	DTX3L	Q8TDB6	740 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ACTRT1	Q8TDG2	376 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PYROXD1	Q8WU10	500 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	GBA3	Q9H227	469 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	GOLPH3	Q9H4A6	298 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TFR2	Q9UP52	801 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	KIF25-AS1	Q9Y6Z4	181 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	THADA	Q6YHU6	1953 aa		4.27	□□□□□ -1.73
SMARCA2-240	ENST00000635392	KNL1	Q8NG31	2342 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	KIR2DL5B	A0A0G2JN68	375 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	KIR2DL5B	A0A0G2JPC4	375 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	LOC285095	A0A1B0GVY8	99 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PSMB11	A5LHX3	300 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PFDN6	O15212	129 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	IGHV2-5	P01817	119 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	FGG	P02679	453 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	HLA-DQB2	P05538	268 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	YAP1	P46937	504 aa	Known RBP	4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	RGR	P47804	291 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	MARCKSL1	P49006	195 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	CSNK1E	P49674	416 aa	Known RBP	4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PRRX1	P54821	245 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	APOC4	P55056	127 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	DLX1	P56177	255 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	MAX	P61244	160 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	GNG11	P61952	73 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TLE4	Q04727	773 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TGM3	Q08188	693 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ELOC	Q15369	112 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	CASC10	Q5T4H9	136 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TMIGD1	Q6UXZ0	262 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392		Q6ZSR3	168 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392		Q6ZSR6	202 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	TMEM179B	Q7Z7N9	219 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	KIR2DL5A	Q8N109	375 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ZNF567	Q8N184	647 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	DEFB119	Q8N690	84 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	OR6C4	Q8NGE1	309 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	KIR2DL5B	Q8NHK3	375 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PLPPR1	Q8TBJ4	325 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PIH1D2	Q8WWB5	315 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	NAPG	Q99747	312 aa	Predicted RBP	4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	ANKRA2	Q9H9E1	313 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PLSCR3	Q9NRY6	295 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	PRR34	Q9NV39	138 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	AIG1	Q9NVV5	245 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	B4GALT7	Q9UBV7	327 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	BTNL2	Q9UIR0	455 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	SNX12	Q9UMY4	172 aa		4.26	□□□□□ -1.73
SMARCA2-240	ENST00000635392	STARD10	Q9Y365	291 aa		4.26	□□□□□ -1.73

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