RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 SMAD9O15198 467 aaKnown RBP17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 MT-CO3P00414 261 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 CX3CR1P49238 355 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 VEGFCP49767 419 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 GUCA2AQ02747 115 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 EIF3IQ13347 325 aaKnown RBP17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 LINC00303Q3SY05 128 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 GGNQ86UU5 652 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 BEST4Q8NFU0 473 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 OR52N4Q8NGI2 321 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 GRPEL2Q8TAA5 225 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 GPX8Q8TED1 209 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 NABP1Q96AH0 204 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 UQCC2Q9BRT2 126 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 UTP23Q9BRU9 249 aaKnown RBP17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 NOX3Q9HBY0 568 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 DEPPQ9NTK1 212 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 DOCK10Q96BY6 2186 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 NCOA6Q14686 2063 aaPredicted RBP17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 SMLR1H3BR10 107 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 DHHO43323 396 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 TGM6O95932 706 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 SLC2A1P11166 492 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 RAB3AP20336 220 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 RAB6AP20340 208 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 SELENOPP49908 381 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 ENDOGQ14249 297 aaKnown RBP17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 ABHD12BQ7Z5M8 362 aaPredicted RBP17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 SLC22A24Q8N4F4 322 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 THOC3Q96J01 351 aaKnown RBP17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 METTL17Q9H7H0 456 aaPredicted RBP17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 ZNF319Q9P2F9 582 aa17.4■□□□□ 0.38
PCDHB11-202ENST00000624887 A0A1B0GUH1 482 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 TERTO14746 1132 aaKnown RBP17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 ARPC1BO15143 372 aaKnown RBP17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 ICMTO60725 284 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 NDUFB6O95139 128 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 SULT1A3P0DMM9 295 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 SULT1A4P0DMN0 295 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 ANXA3P12429 323 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 CCL1P22362 96 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 DLSTP36957 453 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 OC90Q02509 493 aaPredicted RBP17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 C20orf196Q8IYI0 205 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 ZNF283Q8N7M2 679 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 GJC3Q8NFK1 279 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 OR4C16Q8NGL9 310 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 DACT3Q96B18 629 aaPredicted RBP17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 BEX1Q9HBH7 125 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 ZNF222Q9UK12 451 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 FABP7O15540 132 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 HPXP02790 462 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 ZNF20P17024 532 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 CXCL3P19876 107 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 CNR1P21554 472 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 MECP2P51608 486 aaKnown RBP17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 CARD18P57730 90 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 ARPC4P59998 168 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 Q5BKY6 102 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 METTL11BQ5VVY1 283 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 SLC25A25Q6KCM7 469 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 JMJD6Q6NYC1 403 aaPredicted RBP17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 PIAS4Q8N2W9 510 aaPredicted RBP17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 MS4A3Q96HJ5 214 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 HYLS1Q96M11 299 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 SFXN2Q96NB2 322 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 GPR84Q9NQS5 396 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 RAB22AQ9UL26 194 aa17.39■□□□□ 0.37
PCDHB11-202ENST00000624887 ZNF318Q5VUA4 2279 aa17.38■□□□□ 0.37
PCDHB11-202ENST00000624887 ERCC1P07992 297 aaPredicted RBP17.38■□□□□ 0.37
PCDHB11-202ENST00000624887 HIST1H3AP68431 136 aa17.38■□□□□ 0.37
PCDHB11-202ENST00000624887 CSRP2Q16527 193 aa17.38■□□□□ 0.37
PCDHB11-202ENST00000624887 HIST2H3PS2Q5TEC6 136 aa17.38■□□□□ 0.37
PCDHB11-202ENST00000624887 OR10K2Q6IF99 312 aa17.38■□□□□ 0.37
PCDHB11-202ENST00000624887 HIST2H3AQ71DI3 136 aa17.38■□□□□ 0.37
PCDHB11-202ENST00000624887 ZNF627Q7L945 461 aa17.38■□□□□ 0.37
PCDHB11-202ENST00000624887 COMMD2Q86X83 199 aa17.38■□□□□ 0.37
PCDHB11-202ENST00000624887 CLEC1AQ8NC01 280 aa17.38■□□□□ 0.37
PCDHB11-202ENST00000624887 OR13C9Q8NGT0 318 aa17.38■□□□□ 0.37
PCDHB11-202ENST00000624887 SEH1LQ96EE3 360 aa17.38■□□□□ 0.37
PCDHB11-202ENST00000624887 ADGRG7Q96K78 797 aa17.38■□□□□ 0.37
PCDHB11-202ENST00000624887 RBM24Q9BX46 236 aaKnown RBP17.38■□□□□ 0.37
PCDHB11-202ENST00000624887 ULBP2Q9BZM5 246 aa17.38■□□□□ 0.37
PCDHB11-202ENST00000624887 SCPEP1Q9HB40 452 aa17.38■□□□□ 0.37
PCDHB11-202ENST00000624887 ZFP64Q9NPA5 681 aa17.38■□□□□ 0.37
PCDHB11-202ENST00000624887 A6NL46 340 aa17.37■□□□□ 0.37
PCDHB11-202ENST00000624887 SSNA1O43805 119 aa17.37■□□□□ 0.37
PCDHB11-202ENST00000624887 BPNT1O95861 308 aa17.37■□□□□ 0.37
PCDHB11-202ENST00000624887 LPLP06858 475 aa17.37■□□□□ 0.37
PCDHB11-202ENST00000624887 AKAIN1P0CW23 69 aa17.37■□□□□ 0.37
PCDHB11-202ENST00000624887 GTF2F2P13984 249 aa17.37■□□□□ 0.37
PCDHB11-202ENST00000624887 ACTBP60709 375 aa17.37■□□□□ 0.37
PCDHB11-202ENST00000624887 ACTG1P63261 375 aa17.37■□□□□ 0.37
PCDHB11-202ENST00000624887 GALK2Q01415 458 aa17.37■□□□□ 0.37
PCDHB11-202ENST00000624887 PMPCAQ10713 525 aa17.37■□□□□ 0.37
PCDHB11-202ENST00000624887 WIPI1Q5MNZ9 446 aaPredicted RBP17.37■□□□□ 0.37
PCDHB11-202ENST00000624887 FAM57BQ71RH2 274 aa17.37■□□□□ 0.37
PCDHB11-202ENST00000624887 DOK3Q7L591 496 aa17.37■□□□□ 0.37
PCDHB11-202ENST00000624887 SLC39A7Q92504 469 aa17.37■□□□□ 0.37
PCDHB11-202ENST00000624887 MED30Q96HR3 178 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms