RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 BTNL3Q6UXE8 466 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 ZNF679Q8IYX0 411 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 ZFP62Q8NB50 900 aaPredicted RBP8.06□□□□□ -1.12
HDAC9-229ENST00000622668 SSC4DQ8WTU2 575 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 C12orf10Q9HB07 376 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 RYDENQ9NUL5 291 aaKnown RBP8.06□□□□□ -1.12
HDAC9-229ENST00000622668 ZNF221Q9UK13 617 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 SLC22A13Q9Y226 551 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 KCNIP3Q9Y2W7 256 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 UBE2J1Q9Y385 318 aaPredicted RBP8.06□□□□□ -1.12
HDAC9-229ENST00000622668 U3KQA8 63 aa8.06□□□□□ -1.12
HDAC9-229ENST00000622668 ANKRD33BA6NCL7 494 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 L7N2F9 121 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 SPINT2O43291 252 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 ZNF254O75437 659 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 IL3RAP26951 378 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 BLVRBP30043 206 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-229ENST00000622668 VAMP2P63027 116 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 ETFDHQ16134 617 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 SPNS3Q6ZMD2 512 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 TMPRSS11FQ6ZWK6 438 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 CREB3L2Q70SY1 520 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 OR10AD1Q8NGE0 317 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 OR10K1Q8NGX5 313 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 FLVCR1-AS1Q8TAF5 88 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 S100PBPQ96BU1 408 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 OPALINQ96PE5 141 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 GPN1Q9HCN4 374 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-229ENST00000622668 RCE1Q9Y256 329 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 B8ZZF3 427 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 E9PLN8 166 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 ACOT8O14734 319 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 DXOO77932 396 aaKnown RBP8.05□□□□□ -1.12
HDAC9-229ENST00000622668 DUSP1P28562 367 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 ERVK-16P61578 105 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 FAM26EQ8N5C1 309 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 ACBD4Q8NC06 268 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 CCDC107Q8WV48 283 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 VKORC1Q9BQB6 163 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 NOX4Q9NPH5 578 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 ACOXLQ9NUZ1 547 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 ZNF222Q9UK12 451 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 JMJD1CQ15652 2540 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 CDRT15L2A8MXV6 281 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 NEURL1O76050 574 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 MPZL1O95297 269 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 GNAO1P09471 354 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 SLC2A2P11168 524 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-229ENST00000622668 HLA-DOBP13765 273 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 PCMT1P22061 227 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 PCSK6P29122 969 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 CLDN12P56749 244 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 SMIM21Q3B7S5 101 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 PLA1AQ53H76 456 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 SSX8Q7RTT4 187 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 PRSS48Q7RTY5 328 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 PLPP7Q8NBV4 271 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 BBS1Q8NFJ9 593 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 FOXRED1Q96CU9 486 aaPredicted RBP8.05□□□□□ -1.12
HDAC9-229ENST00000622668 C4orf45Q96LM5 186 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 ZNF285Q96NJ3 590 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 ACKR4Q9NPB9 350 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 V9GY05 133 aa8.05□□□□□ -1.12
HDAC9-229ENST00000622668 DISC1C4P0D8 188 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 H3BMH7 237 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 SLC22A1O15245 554 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 NCR1O76036 304 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 NGFRP08138 427 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 IL11P20809 199 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 RBMXP38159 391 aaKnown RBP8.04□□□□□ -1.12
HDAC9-229ENST00000622668 IGLV3-21P80748 117 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-229ENST00000622668 DRAM2Q6UX65 266 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 NUFIP2Q7Z417 695 aaKnown RBP8.04□□□□□ -1.12
HDAC9-229ENST00000622668 OR5H2Q8NGV7 314 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 SLC35B4Q969S0 331 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 DGCR14Q96DF8 476 aaKnown RBP8.04□□□□□ -1.12
HDAC9-229ENST00000622668 SORCS2Q96PQ0 1159 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 KCNJ15Q99712 375 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 FLVCR1Q9Y5Y0 555 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 ZNF816-ZNF321PA0A0X1KG74 233 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 SLC16A6O15403 523 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 C21orf58P58505 322 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 TSEN54Q7Z6J9 526 aaKnown RBP8.04□□□□□ -1.12
HDAC9-229ENST00000622668 CTHRC1Q96CG8 243 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 MS4A3Q96HJ5 214 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 CNOT11Q9UKZ1 510 aaKnown RBP8.04□□□□□ -1.12
HDAC9-229ENST00000622668 SESN1Q9Y6P5 492 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 HEATR5BQ9P2D3 2071 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 CD1EP15812 388 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 GPM6AP51674 278 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 Q499Y3 187 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 OGFRL1Q5TC84 451 aaPredicted RBP8.04□□□□□ -1.12
HDAC9-229ENST00000622668 Q6ZS92 163 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 ANGPTL5Q86XS5 388 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 CMTM1Q8IZ96 169 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 WDSUB1Q8N9V3 476 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 S100ZQ8WXG8 99 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 TSPAN32Q96QS1 320 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 OR14A2Q96R54 314 aa8.04□□□□□ -1.12
HDAC9-229ENST00000622668 OR2B2Q9GZK3 357 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms