RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 FAM157AC9JC47 383 aa11.18□□□□□ -0.62
LITAF-221ENST00000622633 PRKNO60260 465 aaPredicted RBP11.18□□□□□ -0.62
LITAF-221ENST00000622633 SPARCP09486 303 aa11.18□□□□□ -0.62
LITAF-221ENST00000622633 SRMP19623 302 aa11.18□□□□□ -0.62
LITAF-221ENST00000622633 HNRNPA2B1P22626 353 aaKnown RBP11.18□□□□□ -0.62
LITAF-221ENST00000622633 AGTR1P30556 359 aa11.18□□□□□ -0.62
LITAF-221ENST00000622633 WNT5AP41221 380 aa11.18□□□□□ -0.62
LITAF-221ENST00000622633 DHPSP49366 369 aaPredicted RBP11.18□□□□□ -0.62
LITAF-221ENST00000622633 GAS6Q14393 721 aa11.18□□□□□ -0.62
LITAF-221ENST00000622633 HIST2H3PS2Q5TEC6 136 aa11.18□□□□□ -0.62
LITAF-221ENST00000622633 NCR3LG1Q68D85 454 aa11.18□□□□□ -0.62
LITAF-221ENST00000622633 HEPN1Q6WQI6 88 aa11.18□□□□□ -0.62
LITAF-221ENST00000622633 Q6ZSR6 202 aa11.18□□□□□ -0.62
LITAF-221ENST00000622633 C7orf61Q8IZ16 206 aa11.18□□□□□ -0.62
LITAF-221ENST00000622633 ZNF433Q8N7K0 673 aaPredicted RBP11.18□□□□□ -0.62
LITAF-221ENST00000622633 OIT3Q8WWZ8 545 aa11.18□□□□□ -0.62
LITAF-221ENST00000622633 METTL21AQ8WXB1 218 aa11.18□□□□□ -0.62
LITAF-221ENST00000622633 HOXB13Q92826 284 aaPredicted RBP11.18□□□□□ -0.62
LITAF-221ENST00000622633 MRGPRX1Q96LB2 322 aa11.18□□□□□ -0.62
LITAF-221ENST00000622633 GFI1Q99684 422 aa11.18□□□□□ -0.62
LITAF-221ENST00000622633 LMF2Q9BU23 707 aaKnown RBP11.18□□□□□ -0.62
LITAF-221ENST00000622633 ANKRD10Q9NXR5 420 aa11.18□□□□□ -0.62
LITAF-221ENST00000622633 ZNF346Q9UL40 294 aaKnown RBP11.18□□□□□ -0.62
LITAF-221ENST00000622633 TNFSF18Q9UNG2 199 aa11.18□□□□□ -0.62
LITAF-221ENST00000622633 TCRBV21S2A2A0A5A6 115 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 C9J4A7 227 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 PPP1R2P9O14990 202 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 CD74P04233 296 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 CAV2P51636 162 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 CLDN12P56749 244 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 GGTLC2Q14390 218 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 JOSD1Q15040 202 aaPredicted RBP11.17□□□□□ -0.62
LITAF-221ENST00000622633 NKPD1Q17RQ9 610 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 FAAP20Q6NZ36 180 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 UNQ9370/PRO34162Q6UXP9 181 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 ZNF550Q7Z398 422 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 ZNF784Q8NCA9 323 aaPredicted RBP11.17□□□□□ -0.62
LITAF-221ENST00000622633 ADPRHL1Q8NDY3 354 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 OR4C3Q8NH37 302 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 VSTM2LQ96N03 204 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 KNL1Q8NG31 2342 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 A0A1W2PN81 502 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 GGT3PA6NGU5 568 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 PRR32B1ATL7 298 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 ZNF587BE7ETH6 402 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 PYCARD-AS1I3L0S3 204 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 MFNGO00587 321 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 TNFRSF10CO14798 259 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 CTDSPLO15194 276 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 SIAH2O43255 324 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 OPN1LWP04000 364 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 CD5P06127 495 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 GZMBP10144 247 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 CHRNA7P36544 502 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 CHRFAM7AQ494W8 412 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 UBE2NLQ5JXB2 153 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 C11orf88Q6PI97 169 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 DPY19L2P2Q6ZN68 376 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 FCRLAQ7L513 359 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 ZNF283Q8N7M2 679 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 GALNT14Q96FL9 552 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 YPEL4Q96NS1 127 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 CBLN4Q9NTU7 201 aa11.17□□□□□ -0.62
LITAF-221ENST00000622633 ZNF230Q9UIE0 474 aaPredicted RBP11.17□□□□□ -0.62
LITAF-221ENST00000622633 YBX2Q9Y2T7 364 aaKnown RBP11.17□□□□□ -0.62
LITAF-221ENST00000622633 ELOA3CA0A087WX78 387 aaPredicted RBP11.16□□□□□ -0.62
LITAF-221ENST00000622633 A0A1W2PPE2 198 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 J3QW42 95 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 NDUFB6O95139 128 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 CSTAP01040 98 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 FAM157CP0CG43 387 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 ST6GAL1P15907 406 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 NME2P22392 152 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 SERPINF1P36955 418 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 PBX2P40425 430 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 RPS10P46783 165 aaKnown RBP11.16□□□□□ -0.62
LITAF-221ENST00000622633 NANOS3P60323 173 aaKnown RBP11.16□□□□□ -0.62
LITAF-221ENST00000622633 ZNF141Q15928 474 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 STPG1Q5TH74 334 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 GLT8D1Q68CQ7 371 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 MUC20Q8N307 709 aaPredicted RBP11.16□□□□□ -0.62
LITAF-221ENST00000622633 OR56B2PQ8NGI1 322 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 OR52I2Q8NH67 350 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 SLC37A2Q8TED4 501 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 AKR1E2Q96JD6 320 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 PACRGQ96M98 296 aaPredicted RBP11.16□□□□□ -0.62
LITAF-221ENST00000622633 POTEKPQ9BYX7 375 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 ADAM19Q9H013 955 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 MTIF3Q9H2K0 278 aaKnown RBP11.16□□□□□ -0.62
LITAF-221ENST00000622633 UBQLN4Q9NRR5 601 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 USP34Q70CQ2 3546 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 HIST1H2BKO60814 126 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 HIST1H2BJP06899 126 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 HIST1H2BOP23527 126 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 S100A7P31151 101 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 HIST1H2BBP33778 126 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 OR3A1P47881 315 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 HIST1H2BDP58876 126 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 HIST1H2BCP62807 126 aa11.16□□□□□ -0.62
LITAF-221ENST00000622633 HIST2H2BEQ16778 126 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms