RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 OLFML2AQ68BL7 652 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 MEIOBQ8N635 442 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 ASB5Q8WWX0 329 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 KCTD12Q96CX2 325 aaKnown RBP9.26□□□□□ -0.93
VPS11-208ENST00000621676 GPX7Q96SL4 187 aaPredicted RBP9.26□□□□□ -0.93
VPS11-208ENST00000621676 TP63Q9H3D4 680 aaPredicted RBP9.26□□□□□ -0.93
VPS11-208ENST00000621676 TINAGQ9UJW2 476 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 ING4Q9UNL4 249 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 V9GYH0 126 aa9.26□□□□□ -0.93
VPS11-208ENST00000621676 ACOT7O00154 380 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 SGCEO43556 437 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 APOA1P02647 267 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 TTRP02766 147 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 PTGER4P35408 488 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 ERVS71-1P61550 626 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 HGFACQ04756 655 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 MOGAT2Q3SYC2 334 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 PLEKHN1Q494U1 663 aaPredicted RBP9.25□□□□□ -0.93
VPS11-208ENST00000621676 PABPC1L2AQ5JQF8 200 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 CD163Q86VB7 1156 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 OR4S1Q8NGB4 309 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 DYRK2Q92630 601 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 RNF166Q96A37 237 aaPredicted RBP9.25□□□□□ -0.93
VPS11-208ENST00000621676 MRPL13Q9BYD1 178 aaKnown RBP9.25□□□□□ -0.93
VPS11-208ENST00000621676 TMEM235A6NFC5 223 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 M0R135 149 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 TOXO94900 526 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 ABHD16AO95870 558 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 VEGFCP49767 419 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 LHX2P50458 406 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 ZNF84P51523 738 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 SLC25A1P53007 311 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 PPP3R1P63098 170 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 SLC35D3Q5M8T2 416 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 TMEM69Q5SWH9 247 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 OR4D6Q8NGJ1 314 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 SLC25A43Q8WUT9 341 aaPredicted RBP9.25□□□□□ -0.93
VPS11-208ENST00000621676 S100ZQ8WXG8 99 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 AP3S1Q92572 193 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 ZNF799Q96GE5 643 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 PAPOLGQ9BWT3 736 aaKnown RBP9.25□□□□□ -0.93
VPS11-208ENST00000621676 HAO2Q9NYQ3 351 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 CYB5R1Q9UHQ9 305 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 HHLA2Q9UM44 414 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 SPATA2Q9UM82 520 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 ADAMTS20P59510 1910 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 SLC22A20A6NK97 555 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 IFITM5A6NNB3 132 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 SLC43A1O75387 559 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 RAB40ALP0C0E4 278 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 MSR1P21757 451 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 CDK2P24941 298 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 SUMO3P55854 103 aaPredicted RBP9.25□□□□□ -0.93
VPS11-208ENST00000621676 LY6DQ14210 128 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 C2orf76Q3KRA6 126 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 SCGB2B2Q4G0G5 96 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 C1QL2Q7Z5L3 287 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 CADM3Q8N126 398 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 COX4I2Q96KJ9 171 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 THAP7Q9BT49 309 aaPredicted RBP9.25□□□□□ -0.93
VPS11-208ENST00000621676 CKLFQ9UBR5 152 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 OR5V1Q9UGF6 321 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 PIGLQ9Y2B2 252 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 TP53TG5Q9Y2B4 290 aa9.25□□□□□ -0.93
VPS11-208ENST00000621676 KLF13Q9Y2Y9 288 aaPredicted RBP9.25□□□□□ -0.93
VPS11-208ENST00000621676 CDRT15L2A8MXV6 281 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 TFF1P04155 84 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 CD63P08962 238 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 GABRR1P24046 479 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 GIFP27352 417 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 DCTDP32321 178 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 UGT2B10P36537 528 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 RAB1AP62820 205 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 AWAT2Q6E213 333 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 ASPHD2Q6ICH7 369 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 CCDC190Q86UF4 302 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 BOLLQ8N9W6 283 aaKnown RBP9.24□□□□□ -0.93
VPS11-208ENST00000621676 OR1J2Q8NGS2 313 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 OR52I2Q8NH67 350 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 NICN1Q9BSH3 213 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 RCE1Q9Y256 329 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 TNRC6BQ9UPQ9 1833 aaKnown RBP9.24□□□□□ -0.93
VPS11-208ENST00000621676 SETD2Q9BYW2 2564 aaPredicted RBP9.24□□□□□ -0.93
VPS11-208ENST00000621676 ARFGEF3Q5TH69 2177 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 TTLL8A6PVC2 850 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 M0QYG6 137 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 EIF1BO60739 113 aaKnown RBP9.24□□□□□ -0.93
VPS11-208ENST00000621676 OR3A4PP47883 348 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 RRADP55042 308 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 CLDN18P56856 261 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 TAS2R43P59537 309 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 PSG4Q00888 419 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 EMC4Q5J8M3 183 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 MZT2AQ6P582 158 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 FGD2Q7Z6J4 655 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 GVQW1Q8N7I0 195 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 OR6X1Q8NH79 312 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 APH1AQ96BI3 265 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 CHIAQ9BZP6 476 aa9.24□□□□□ -0.93
VPS11-208ENST00000621676 SELENOIQ9C0D9 397 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms