RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 BCL2L2Q92843 193 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-214ENST00000620676 VSIG4Q9Y279 399 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 C1QAP02745 245 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 PRF1P14222 555 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF468Q5VIY5 522 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-214ENST00000620676 C22orf39Q6P5X5 142 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 MOB3CQ70IA8 216 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 ZSCAN4Q8NAM6 433 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-214ENST00000620676 SLC25A28Q96A46 364 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 TM4SF18Q96CE8 201 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 MISP3Q96FF7 219 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 PRRG4Q9BZD6 226 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 OR1A1Q9P1Q5 309 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 DNMT3BQ9UBC3 853 aaKnown RBP4.57□□□□□ -1.68
VPS13D-214ENST00000620676 TINAGQ9UJW2 476 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 ROBO1Q9Y6N7 1651 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 C9orf170A2RU37 121 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 CCKARP32238 428 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 DLX2Q07687 328 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-214ENST00000620676 GALNT16Q8N428 558 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 LRIT1Q9P2V4 623 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 RNF150Q9ULK6 438 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 PPIAL4AQ9Y536 164 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 SLCO1B1Q9Y6L6 691 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 RRP8O43159 456 aaKnown RBP4.57□□□□□ -1.68
VPS13D-214ENST00000620676 DAP3P51398 398 aaKnown RBP4.57□□□□□ -1.68
VPS13D-214ENST00000620676 MMP16P51512 607 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 LANCL3Q6ZV70 420 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 DIRC2Q96SL1 478 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM9BQ9NQ34 198 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 SERINC1Q9NRX5 453 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 C20orf141Q9NUB4 165 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 TMED7Q9Y3B3 224 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 DIDO1Q9BTC0 2240 aaKnown RBP4.57□□□□□ -1.68
VPS13D-214ENST00000620676 CHD2O14647 1828 aaKnown RBP4.57□□□□□ -1.68
VPS13D-214ENST00000620676 UBE2L5PA0A1B0GUS4 154 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 SUOXP51687 545 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 OR14L1PQ8NHC6 308 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF160Q9HCG1 818 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 FTSJ1Q9UET6 329 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 H3BML4 177 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 M0QZK8 103 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 TGM5O43548 720 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 ENSAO43768 121 aaKnown RBP4.57□□□□□ -1.68
VPS13D-214ENST00000620676 GGCTO75223 188 aaKnown RBP4.57□□□□□ -1.68
VPS13D-214ENST00000620676 JTBO76095 146 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 APBB3O95704 486 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 C1SP09871 688 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 TAS2R46P59540 309 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 TPBGQ13641 420 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 PRR27Q6MZM9 219 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 GPR142Q7Z601 462 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 PIGTQ969N2 578 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 RBM24Q9BX46 236 aaKnown RBP4.57□□□□□ -1.68
VPS13D-214ENST00000620676 FBXL17Q9UF56 701 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 DHRS7CA6NNS2 312 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 H3BNC9 293 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 LCATP04180 440 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 HSD11B2P80365 405 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 GABRA6Q16445 453 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF841Q6ZN19 808 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM151BQ8IW70 566 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 TRAM1L1Q8N609 369 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 OR1L6Q8NGR2 347 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 ABHD6Q9BV23 337 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 TREM2Q9NZC2 230 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 PIGLQ9Y2B2 252 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 EP300Q09472 2414 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-214ENST00000620676 PLIN4Q96Q06 1357 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 BCL9LQ86UU0 1499 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 FTCDNL1E5RQL4 147 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 SNAI2O43623 268 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 TOX4O94842 621 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 DUSP3P51452 185 aaPredicted RBP4.57□□□□□ -1.68
VPS13D-214ENST00000620676 STUMQ69YW2 141 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 LGI3Q8N145 548 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 NEURL3Q96EH8 262 aa4.57□□□□□ -1.68
VPS13D-214ENST00000620676 CICQ96RK0 1608 aaPredicted RBP4.56□□□□□ -1.68
VPS13D-214ENST00000620676 MYADML2A6NDP7 307 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 H3BVH4 76 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 MOSPD3O75425 235 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 CRYABP02511 175 aaKnown RBP4.56□□□□□ -1.68
VPS13D-214ENST00000620676 OR5G3P0C626 314 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 FUT10Q6P4F1 479 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 SPNS3Q6ZMD2 512 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 EXD3Q8N9H8 876 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 ZDHHC5Q9C0B5 715 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 NRSN2Q9GZP1 204 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 C1orf198Q9H425 327 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 ERVFRD-1P60508 538 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 PFN3P60673 137 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 ZNF154Q13106 437 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 PLCXD3Q63HM9 321 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 TMEM91Q6ZNR0 172 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 LHX4Q969G2 390 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 ALKBH7Q9BT30 221 aaPredicted RBP4.56□□□□□ -1.68
VPS13D-214ENST00000620676 OR2J1Q9GZK6 312 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 CLDND1Q9NY35 253 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 RNF212BA8MTL3 300 aa4.56□□□□□ -1.68
VPS13D-214ENST00000620676 ST8SIA3O43173 380 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms