RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 SLAMF6Q96DU3 332 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 DIRC2Q96SL1 478 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 INTS14Q96SY0 518 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 C1QTNF5Q9BXJ0 243 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 TEX12Q9BXU0 123 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 SLC25A19Q9HC21 320 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 TREM2Q9NZC2 230 aa13.57□□□□□ -0.24
BRCA1-228ENST00000618469 CLDN25C9JDP6 229 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 ZNF878C9JN71 531 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 GLCEO94923 617 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 CD55P08174 381 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 TNFSF4P23510 183 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 DAPP51397 102 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 TMEM33P57088 247 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 EIF2B1Q14232 305 aaKnown RBP13.56□□□□□ -0.24
BRCA1-228ENST00000618469 TAF13Q15543 124 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 PCK2Q16822 640 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 HFEQ30201 348 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 KLHL12Q53G59 568 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 FAM166AQ6J272 317 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 COLCA1Q6ZS62 124 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 AMIGO2Q86SJ2 522 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 NAA40Q86UY6 237 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 PARP8Q8N3A8 854 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 BHLHE23Q8NDY6 225 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 CLDND2Q8NHS1 167 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 ST7LQ8TDW4 575 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 LRTOMTQ8WZ04 291 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 HPS1Q92902 700 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 ZMYND19Q96E35 227 aaPredicted RBP13.56□□□□□ -0.24
BRCA1-228ENST00000618469 DUS3LQ96G46 650 aaKnown RBP13.56□□□□□ -0.24
BRCA1-228ENST00000618469 KRT84Q9NSB2 600 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 CENPMQ9NSP4 180 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 KCNS2Q9ULS6 477 aa13.56□□□□□ -0.24
BRCA1-228ENST00000618469 G3V2T6 193 aa13.55□□□□□ -0.24
BRCA1-228ENST00000618469 WNT9BO14905 357 aa13.55□□□□□ -0.24
BRCA1-228ENST00000618469 CRISP1P54107 249 aa13.55□□□□□ -0.24
BRCA1-228ENST00000618469 RPS7P62081 194 aaKnown RBP13.55□□□□□ -0.24
BRCA1-228ENST00000618469 MVKQ03426 396 aa13.55□□□□□ -0.24
BRCA1-228ENST00000618469 MALLQ13021 153 aa13.55□□□□□ -0.24
BRCA1-228ENST00000618469 HNRNPA0Q13151 305 aaKnown RBP13.55□□□□□ -0.24
BRCA1-228ENST00000618469 CDK5R2Q13319 367 aa13.55□□□□□ -0.24
BRCA1-228ENST00000618469 SPRNQ5BIV9 151 aa13.55□□□□□ -0.24
BRCA1-228ENST00000618469 TEX30Q5JUR7 227 aa13.55□□□□□ -0.24
BRCA1-228ENST00000618469 DPY19L4Q7Z388 723 aa13.55□□□□□ -0.24
BRCA1-228ENST00000618469 CPOQ8IVL8 374 aa13.55□□□□□ -0.24
BRCA1-228ENST00000618469 BBS1Q8NFJ9 593 aa13.55□□□□□ -0.24
BRCA1-228ENST00000618469 OR10AD1Q8NGE0 317 aa13.55□□□□□ -0.24
BRCA1-228ENST00000618469 CCL17Q92583 94 aa13.55□□□□□ -0.24
BRCA1-228ENST00000618469 GABARAPL1Q9H0R8 117 aa13.55□□□□□ -0.24
BRCA1-228ENST00000618469 SEMA6AQ9H2E6 1030 aa13.55□□□□□ -0.24
BRCA1-228ENST00000618469 TVP23BQ9NYZ1 205 aa13.55□□□□□ -0.24
BRCA1-228ENST00000618469 ANK2Q01484 3957 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 MALRD1Q5VYJ5 2156 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 PRODHO43272 600 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 SELENOFO60613 162 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 LMX1BO60663 402 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 MITFO75030 526 aaPredicted RBP13.54□□□□□ -0.24
BRCA1-228ENST00000618469 TGFAP01135 160 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 SLC2A1P11166 492 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 ANOS1P23352 680 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 IGFBP5P24593 272 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 OTX1P32242 354 aaPredicted RBP13.54□□□□□ -0.24
BRCA1-228ENST00000618469 NAA10P41227 235 aaPredicted RBP13.54□□□□□ -0.24
BRCA1-228ENST00000618469 PRKXP51817 358 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 GK2Q14410 553 aaPredicted RBP13.54□□□□□ -0.24
BRCA1-228ENST00000618469 SNAPC1Q16533 368 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 SNAI3Q3KNW1 292 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 DRAM2Q6UX65 266 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 MRPL21Q7Z2W9 205 aaKnown RBP13.54□□□□□ -0.24
BRCA1-228ENST00000618469 ZDHHC13Q8IUH4 622 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 TIGD4Q8IY51 512 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 ZNF283Q8N7M2 679 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 ITLN1Q8WWA0 313 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 PYDC1Q8WXC3 89 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 TIMD4Q96H15 378 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 ZNF582Q96NG8 517 aaPredicted RBP13.54□□□□□ -0.24
BRCA1-228ENST00000618469 PRRG3Q9BZD7 231 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 MARCH7Q9H992 704 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 CDC42EP3Q9UKI2 254 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 WIPI2Q9Y4P8 454 aa13.54□□□□□ -0.24
BRCA1-228ENST00000618469 IQCF6A8MYZ5 107 aa13.53□□□□□ -0.24
BRCA1-228ENST00000618469 EBAG9O00559 213 aa13.53□□□□□ -0.24
BRCA1-228ENST00000618469 SELEP16581 610 aa13.53□□□□□ -0.24
BRCA1-228ENST00000618469 TNFRSF1AP19438 455 aa13.53□□□□□ -0.24
BRCA1-228ENST00000618469 HSD11B1P28845 292 aa13.53□□□□□ -0.24
BRCA1-228ENST00000618469 CX3CR1P49238 355 aa13.53□□□□□ -0.24
BRCA1-228ENST00000618469 CDH15P55291 814 aa13.53□□□□□ -0.24
BRCA1-228ENST00000618469 ESRRGP62508 458 aa13.53□□□□□ -0.24
BRCA1-228ENST00000618469 GRB2P62993 217 aaKnown RBP13.53□□□□□ -0.24
BRCA1-228ENST00000618469 KPNB1Q14974 876 aaKnown RBP13.53□□□□□ -0.24
BRCA1-228ENST00000618469 PTGES3Q15185 160 aaKnown RBP13.53□□□□□ -0.24
BRCA1-228ENST00000618469 PGAP1Q75T13 922 aa13.53□□□□□ -0.24
BRCA1-228ENST00000618469 SHFQ7M4L6 423 aa13.53□□□□□ -0.24
BRCA1-228ENST00000618469 LINC01356Q8N9X3 169 aa13.53□□□□□ -0.24
BRCA1-228ENST00000618469 OR8G5Q8NG78 346 aa13.53□□□□□ -0.24
BRCA1-228ENST00000618469 OR2AE1Q8NHA4 323 aa13.53□□□□□ -0.24
BRCA1-228ENST00000618469 OR2V2Q96R30 315 aa13.53□□□□□ -0.24
BRCA1-228ENST00000618469 AMELYQ99218 206 aa13.53□□□□□ -0.24
BRCA1-228ENST00000618469 KCNJ15Q99712 375 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms