RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 LSM12Q3MHD2 195 aaKnown RBP5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 ZNF836Q6ZNA1 936 aa5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 ZCCHC23Q6ZST2 131 aa5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 PIGWQ7Z7B1 504 aa5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 SERPINA11Q86U17 422 aa5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 CLDN22Q8N7P3 220 aa5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 OR8U1Q8NH10 309 aa5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 OR6X1Q8NH79 312 aa5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 SLC7A6Q92536 515 aa5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 CDKL2Q92772 493 aa5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 ZNF566Q969W8 418 aa5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 MRRFQ96E11 262 aaKnown RBP5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 C18orf15Q96N68 181 aa5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 C8orf49Q96NF6 230 aa5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 ZNF582Q96NG8 517 aaPredicted RBP5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 TMEM237Q96Q45 408 aa5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 SLC38A1Q9H2H9 487 aa5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 WDR76Q9H967 626 aa5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 SLCO1B3Q9NPD5 702 aa5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 POLE3Q9NRF9 147 aa5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 ZFP57Q9NU63 452 aa5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 NDE1Q9NXR1 346 aa5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 UGT2A1Q9Y4X1 527 aa5.3□□□□□ -1.56
SCAMP1-206ENST00000618166 RNF103-CHMP3A0A140T963 221 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 CDHR4A6H8M9 788 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 DUXAA6NLW8 204 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 PLPP3O14495 311 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 CFLARO15519 480 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 XRCC3O43542 346 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 SAP30O75446 220 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 SPARCP09486 303 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 RPS4Y1P22090 263 aaKnown RBP5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 CD200P41217 278 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 POU3F4P49335 361 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 INSL3P51460 131 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 LGALS4P56470 323 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 COPZ1P61923 177 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 SGCAQ16586 387 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 ZNF678Q5SXM1 525 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 ASPHD1Q5U4P2 390 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 PLBD1Q6P4A8 553 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 SLC35D2Q76EJ3 337 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 PXKQ7Z7A4 578 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 RANBP3LQ86VV4 465 aaPredicted RBP5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 CLECL1Q8IZS7 167 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 CLIP4Q8N3C7 705 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 ZNF645Q8N7E2 425 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 OR2T11Q8NH01 316 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 OIT3Q8WWZ8 545 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 PTP4A1Q93096 173 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 CCT7Q99832 543 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 DPY30Q9C005 99 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 SIAEQ9HAT2 523 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 C1orf123Q9NWV4 160 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 STK38LQ9Y2H1 464 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 TRAV36DV7A0A075B6V5 113 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 A0A1B0GWJ7 208 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 C12orf77C9JDV5 145 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 E7ESA3 106 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 CBFA2T2O43439 604 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 NDUFB3O43676 98 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 OR2T1O43869 369 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 RHBDL1O75783 438 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 PLA2G1BP04054 148 aaKnown RBP5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 IGF1P05019 195 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 ENO1P06733 434 aaKnown RBP5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 GUSBP08236 651 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 ARSBP15848 533 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 IL7RP16871 459 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 LAP3P28838 519 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 GSK3BP49841 420 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 ZNF84P51523 738 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 RPL38P63173 70 aaKnown RBP5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 FMODQ06828 376 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 KIR3DS1Q14943 382 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 KIR2DS1Q14954 304 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 HIST3H3Q16695 136 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 RFTN2Q52LD8 501 aaPredicted RBP5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 PDCD4Q53EL6 469 aaKnown RBP5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 BEND6Q5SZJ8 279 aaPredicted RBP5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 ATAD3BQ5T9A4 648 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 TEX36Q5VZQ5 186 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 ZNF429Q86V71 674 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 SGPP2Q8IWX5 399 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 OR5T2Q8NGG2 359 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 OR5D13Q8NGL4 314 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 SLC38A4Q969I6 547 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 MOAP1Q96BY2 351 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 SLC25A44Q96H78 314 aaPredicted RBP5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 FCRL1Q96LA6 429 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 ZNF583Q96ND8 569 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 KCNN2Q9H2S1 579 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 TMEM100Q9NV29 134 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 ADA2Q9NZK5 511 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 TMCO1Q9UM00 188 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 GUCA1BQ9UMX6 200 aa5.29□□□□□ -1.56
SCAMP1-206ENST00000618166 EXOC1LA0A1B0GW35 172 aa5.28□□□□□ -1.56
SCAMP1-206ENST00000618166 FAM90A22PA8MWA6 464 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms