RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 MEIOCA2RUB1 952 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 NUDT19A8MXV4 375 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 TMEM229AB2RXF0 380 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 RPL36A-HNRNPH2H7BZ11 118 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 DNASE2O00115 360 aaPredicted RBP7.42□□□□□ -1.22
GPC6-202ENST00000617456 SLC25A17O43808 307 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 GAAP10253 952 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 PNMTP11086 282 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 SLC2A1P11166 492 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 UMPSP11172 480 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 ETFAP13804 333 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 GPX2P18283 190 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 PAX6P26367 422 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 G0S2P27469 103 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 NTF4P34130 210 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 OMPP47874 163 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 LIMS1P48059 325 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 SERPINB10P48595 397 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 FOXG1P55316 489 aaPredicted RBP7.42□□□□□ -1.22
GPC6-202ENST00000617456 PRPS1P60891 318 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 NUTF2P61970 127 aaKnown RBP7.42□□□□□ -1.22
GPC6-202ENST00000617456 ACSM1Q08AH1 577 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 ZNF311Q5JNZ3 666 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 OR2B11Q5JQS5 317 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 OTUD3Q5T2D3 398 aaPredicted RBP7.42□□□□□ -1.22
GPC6-202ENST00000617456 C1orf140Q5VVS0 124 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 TMEM225Q6GV28 225 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 KRT80Q6KB66 452 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 REEP3Q6NUK4 255 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 ZNF836Q6ZNA1 936 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 OLIG3Q7RTU3 272 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 SLC46A3Q7Z3Q1 461 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 MAVSQ7Z434 540 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 CCDC103Q8IW40 242 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 POU5F2Q8N7G0 328 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 ZIC4Q8N9L1 334 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 POC5Q8NA72 575 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 TMEM104Q8NE00 496 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 Q8NFD4 153 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 OR9K2Q8NGE7 335 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 OR52E4Q8NGH9 312 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 MAFIPQ8WZ33 124 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 TMEM19Q96HH6 336 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 C14orf144Q96I85 54 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 OR52B2Q96RD2 323 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 BPESC1Q9GZL8 116 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 NIT2Q9NQR4 276 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 SLC17A5Q9NRA2 495 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 SLC6A13Q9NSD5 602 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 RLIMQ9NVW2 624 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 NDUFAF4Q9P032 175 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 KIF25Q9UIL4 384 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 BAIAP2Q9UQB8 552 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 RCE1Q9Y256 329 aa7.42□□□□□ -1.22
GPC6-202ENST00000617456 RPS10-NUDT3A0A1W2PQS6 291 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 C5orf58C9J3I9 102 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 FTCDNL1E5RQL4 147 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 F5H0A9 414 aaPredicted RBP7.41□□□□□ -1.22
GPC6-202ENST00000617456 LDLRAD4O15165 306 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 CHP2O43745 196 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 EIF3GO75821 320 aaKnown RBP eCLIP7.41□□□□□ -1.22
GPC6-202ENST00000617456 RGS9O75916 674 aaPredicted RBP7.41□□□□□ -1.22
GPC6-202ENST00000617456 VENTXO95231 258 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 DIRAS3O95661 229 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 BCHEP06276 602 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 ITGA5P08648 1049 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 OR8G3PP0DMU2 310 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 ZNF182P17025 639 aaPredicted RBP7.41□□□□□ -1.22
GPC6-202ENST00000617456 EGR1P18146 543 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 AHCYP23526 432 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 HLA-DMAP28067 261 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 RGS6P49758 472 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 FHITP49789 147 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 IDH3AP50213 366 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 DEFA1P59665 94 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 DEFA3P59666 94 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 SNRPD2P62316 118 aaKnown RBP7.41□□□□□ -1.22
GPC6-202ENST00000617456 ACTG1P63261 375 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 RBBP4Q09028 425 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 GPR50Q13585 617 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 CEACAM7Q14002 265 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 CCNIQ14094 377 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 MST1LQ2TV78 715 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 LINC01559Q495D7 138 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 FAM69AQ5T7M9 428 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 TSPO2Q5TGU0 170 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 GPR107Q5VW38 600 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 ULK3Q6PHR2 472 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 CASP12Q6UXS9 341 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 AAED1Q7RTV5 226 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 VRK2Q86Y07 508 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 FUNDC1Q8IVP5 155 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 SLC30A8Q8IWU4 369 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 STX19Q8N4C7 294 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 SVOPQ8N4V2 548 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 WDR31Q8NA23 367 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 OR4C15Q8NGM1 316 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 SLC7A6Q92536 515 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 ZNF607Q96SK3 696 aa7.41□□□□□ -1.22
GPC6-202ENST00000617456 CCDC90BQ9GZT6 254 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms